Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 CDC14C-201ENST00000428251 1719 ntBASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 AC004854.2-201ENST00000608450 1441 ntBASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 AC074183.2-201ENST00000623112 922 ntBASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
LINC01558Q9Y6Z2 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
LINC01558Q9Y6Z2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
LINC01558Q9Y6Z2 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
LINC01558Q9Y6Z2 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC8.65□□□□□ -1.03
LINC01558Q9Y6Z2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
LINC01558Q9Y6Z2 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
LINC01558Q9Y6Z2 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
LINC01558Q9Y6Z2 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC8.65□□□□□ -1.03
LINC01558Q9Y6Z2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
LINC01558Q9Y6Z2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
LINC01558Q9Y6Z2 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC8.65□□□□□ -1.03
LINC01558Q9Y6Z2 LINC02447-202ENST00000501888 2146 ntBASIC8.65□□□□□ -1.03
LINC01558Q9Y6Z2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
LINC01558Q9Y6Z2 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
LINC01558Q9Y6Z2 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
LINC01558Q9Y6Z2 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
LINC01558Q9Y6Z2 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC8.65□□□□□ -1.03
LINC01558Q9Y6Z2 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
LINC01558Q9Y6Z2 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
LINC01558Q9Y6Z2 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms