Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 AL021920.2-201ENST00000624828 1351 ntBASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 AC099398.1-201ENST00000567919 2776 ntBASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 RBPMS2P1-201ENST00000437762 623 ntBASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 PP12613-201ENST00000424958 2230 ntBASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 SLC22A20-204ENST00000530038 1673 ntBASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 TUBB3P1-201ENST00000405796 1332 ntBASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 SPDYE7P-202ENST00000420373 878 ntBASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 MPDU1-223ENST00000582151 728 ntBASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 AC008267.7-201ENST00000624570 1194 ntBASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 AL138688.1-201ENST00000624851 1594 ntBASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSNK1G3Q9Y6M4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 UXT-AS1-201ENST00000590504 1525 ntBASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 SLC25A1P3-201ENST00000395415 828 ntBASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 DUX4L27-201ENST00000554796 1261 ntBASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 AJ011932.1-201ENST00000621707 465 ntBASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 AC131009.4-201ENST00000624048 1740 ntBASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 AC108860.2-201ENST00000562760 2183 ntBASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms