Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.21□□□□□ -0.3
TSSC4Q9Y5U2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TSSC4Q9Y5U2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
TSSC4Q9Y5U2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TSSC4Q9Y5U2 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 AP002472.1-201ENST00000577490 586 ntBASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 AC004835.2-201ENST00000603762 682 ntBASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSSC4Q9Y5U2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 FAM86C2P-203ENST00000528684 1004 ntBASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 AC005412.3-201ENST00000580309 715 ntBASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 AL355385.1-201ENST00000606123 409 ntBASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 AC092902.6-201ENST00000641783 218 ntBASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TSSC4Q9Y5U2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms