Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM17Q9Y577 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM17Q9Y577 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM17Q9Y577 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRIM17Q9Y577 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM17Q9Y577 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM17Q9Y577 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
TRIM17Q9Y577 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 AC093525.8-201ENST00000624099 1342 ntBASIC18.81■□□□□ 0.6
TRIM17Q9Y577 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.81■□□□□ 0.6
TRIM17Q9Y577 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 AC010319.3-201ENST00000597028 470 ntBASIC18.81■□□□□ 0.6
TRIM17Q9Y577 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRIM17Q9Y577 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM17Q9Y577 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.8■□□□□ 0.6
TRIM17Q9Y577 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM17Q9Y577 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
TRIM17Q9Y577 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM17Q9Y577 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM17Q9Y577 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM17Q9Y577 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM17Q9Y577 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM17Q9Y577 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM17Q9Y577 SDHAP3-202ENST00000515467 728 ntBASIC18.8■□□□□ 0.6
TRIM17Q9Y577 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM17Q9Y577 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM17Q9Y577 ARL16-210ENST00000574938 751 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM17Q9Y577 MIR4492-201ENST00000581627 80 ntBASIC18.8■□□□□ 0.6
TRIM17Q9Y577 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM17Q9Y577 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM17Q9Y577 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM17Q9Y577 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.8■□□□□ 0.6
TRIM17Q9Y577 AL033527.5-202ENST00000641632 1098 ntBASIC18.8■□□□□ 0.6
TRIM17Q9Y577 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TRIM17Q9Y577 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM17Q9Y577 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRIM17Q9Y577 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM17Q9Y577 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM17Q9Y577 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM17Q9Y577 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM17Q9Y577 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRIM17Q9Y577 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM17Q9Y577 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
TRIM17Q9Y577 AC018665.1-201ENST00000622927 1362 ntBASIC18.8■□□□□ 0.6
TRIM17Q9Y577 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM17Q9Y577 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM17Q9Y577 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM17Q9Y577 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM17Q9Y577 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM17Q9Y577 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM17Q9Y577 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM17Q9Y577 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM17Q9Y577 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM17Q9Y577 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM17Q9Y577 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM17Q9Y577 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM17Q9Y577 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM17Q9Y577 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TRIM17Q9Y577 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM17Q9Y577 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM17Q9Y577 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM17Q9Y577 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.79■□□□□ 0.6
TRIM17Q9Y577 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM17Q9Y577 KLF2P4-201ENST00000451959 1225 ntBASIC18.79■□□□□ 0.6
TRIM17Q9Y577 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM17Q9Y577 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.79■□□□□ 0.6
TRIM17Q9Y577 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
TRIM17Q9Y577 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
TRIM17Q9Y577 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM17Q9Y577 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.79■□□□□ 0.6
TRIM17Q9Y577 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms