Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CALYQ9NYX4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.94□□□□□ -0.18
CALYQ9NYX4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CALYQ9NYX4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CALYQ9NYX4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CALYQ9NYX4 UBALD1-205ENST00000590891 2641 ntBASIC13.94□□□□□ -0.18
CALYQ9NYX4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CALYQ9NYX4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
CALYQ9NYX4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CALYQ9NYX4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CALYQ9NYX4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.93□□□□□ -0.18
CALYQ9NYX4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CALYQ9NYX4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.93□□□□□ -0.18
CALYQ9NYX4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CALYQ9NYX4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.93□□□□□ -0.18
CALYQ9NYX4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CALYQ9NYX4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CALYQ9NYX4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CALYQ9NYX4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.93□□□□□ -0.18
CALYQ9NYX4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.93□□□□□ -0.18
CALYQ9NYX4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
CALYQ9NYX4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CALYQ9NYX4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.93□□□□□ -0.18
CALYQ9NYX4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.93□□□□□ -0.18
CALYQ9NYX4 HLA-J-202ENST00000469281 1241 ntBASIC13.93□□□□□ -0.18
CALYQ9NYX4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CALYQ9NYX4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.93□□□□□ -0.18
CALYQ9NYX4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.93□□□□□ -0.18
CALYQ9NYX4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.93□□□□□ -0.18
CALYQ9NYX4 IGHV3-65-201ENST00000523210 341 ntBASIC13.93□□□□□ -0.18
CALYQ9NYX4 AP002469.2-201ENST00000531724 424 ntBASIC13.93□□□□□ -0.18
CALYQ9NYX4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.93□□□□□ -0.18
CALYQ9NYX4 AC012640.2-201ENST00000561606 901 ntBASIC13.93□□□□□ -0.18
CALYQ9NYX4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.93□□□□□ -0.18
CALYQ9NYX4 MPDU1-223ENST00000582151 728 ntBASIC13.93□□□□□ -0.18
CALYQ9NYX4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.93□□□□□ -0.18
CALYQ9NYX4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CALYQ9NYX4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CALYQ9NYX4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CALYQ9NYX4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CALYQ9NYX4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.93□□□□□ -0.18
CALYQ9NYX4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CALYQ9NYX4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CALYQ9NYX4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CALYQ9NYX4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CALYQ9NYX4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CALYQ9NYX4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CALYQ9NYX4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CALYQ9NYX4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CALYQ9NYX4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CALYQ9NYX4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CALYQ9NYX4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
CALYQ9NYX4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CALYQ9NYX4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CALYQ9NYX4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CALYQ9NYX4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CALYQ9NYX4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CALYQ9NYX4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CALYQ9NYX4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CALYQ9NYX4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.92□□□□□ -0.18
CALYQ9NYX4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CALYQ9NYX4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.92□□□□□ -0.18
CALYQ9NYX4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CALYQ9NYX4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CALYQ9NYX4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CALYQ9NYX4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CALYQ9NYX4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CALYQ9NYX4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CALYQ9NYX4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.92□□□□□ -0.18
CALYQ9NYX4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.92□□□□□ -0.18
CALYQ9NYX4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.92□□□□□ -0.18
CALYQ9NYX4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CALYQ9NYX4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.92□□□□□ -0.18
CALYQ9NYX4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.92□□□□□ -0.18
CALYQ9NYX4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CALYQ9NYX4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.92□□□□□ -0.18
CALYQ9NYX4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.92□□□□□ -0.18
CALYQ9NYX4 AL139011.1-202ENST00000642063 584 ntBASIC13.92□□□□□ -0.18
CALYQ9NYX4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CALYQ9NYX4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CALYQ9NYX4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CALYQ9NYX4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CALYQ9NYX4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CALYQ9NYX4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CALYQ9NYX4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CALYQ9NYX4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CALYQ9NYX4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CALYQ9NYX4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.92□□□□□ -0.18
CALYQ9NYX4 AC006538.1-201ENST00000567905 1585 ntBASIC13.92□□□□□ -0.18
CALYQ9NYX4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CALYQ9NYX4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CALYQ9NYX4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CALYQ9NYX4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CALYQ9NYX4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.91□□□□□ -0.18
CALYQ9NYX4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.91□□□□□ -0.18
CALYQ9NYX4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.91□□□□□ -0.18
CALYQ9NYX4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CALYQ9NYX4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CALYQ9NYX4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.91□□□□□ -0.18
CALYQ9NYX4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms