Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 TERF1P1-201ENST00000311003 1181 ntBASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 BOLL-205ENST00000433157 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 PPP1R26-AS1-201ENST00000455039 643 ntTSL 4 BASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 SLC9A7P1-201ENST00000554295 3311 ntBASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 AC097374.2-201ENST00000618617 1306 ntBASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 HYMAI.1-201ENST00000620949 238 ntBASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXD4L1Q9NU39 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
FOXD4L1Q9NU39 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
FOXD4L1Q9NU39 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
FOXD4L1Q9NU39 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.39■□□□□ 0.86
FOXD4L1Q9NU39 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
FOXD4L1Q9NU39 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.39■□□□□ 0.86
FOXD4L1Q9NU39 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
FOXD4L1Q9NU39 EGFEM1P-202ENST00000431685 1563 ntBASIC20.39■□□□□ 0.85
FOXD4L1Q9NU39 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.39■□□□□ 0.85
FOXD4L1Q9NU39 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FOXD4L1Q9NU39 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FOXD4L1Q9NU39 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
FOXD4L1Q9NU39 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
FOXD4L1Q9NU39 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXD4L1Q9NU39 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXD4L1Q9NU39 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.39■□□□□ 0.85
FOXD4L1Q9NU39 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC20.39■□□□□ 0.85
FOXD4L1Q9NU39 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXD4L1Q9NU39 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FOXD4L1Q9NU39 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXD4L1Q9NU39 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FOXD4L1Q9NU39 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXD4L1Q9NU39 CASK-202ENST00000378158 3848 ntTSL 5 BASIC20.39■□□□□ 0.85
FOXD4L1Q9NU39 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXD4L1Q9NU39 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FOXD4L1Q9NU39 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
FOXD4L1Q9NU39 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
FOXD4L1Q9NU39 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXD4L1Q9NU39 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
FOXD4L1Q9NU39 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 AL049757.1-201ENST00000616842 1596 ntBASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 BX664615.1-201ENST00000443558 458 ntBASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 SPDYE13P-201ENST00000445314 798 ntBASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 RNF139-AS1-202ENST00000519861 359 ntTSL 3 BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 ZNF826P-202ENST00000542380 1067 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 SNRPGP1-201ENST00000553864 222 ntBASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 RPL21P136-201ENST00000605378 396 ntBASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 AP000484.1-201ENST00000620067 1252 ntBASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXD4L1Q9NU39 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.37■□□□□ 0.85
FOXD4L1Q9NU39 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
FOXD4L1Q9NU39 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
FOXD4L1Q9NU39 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.37■□□□□ 0.85
FOXD4L1Q9NU39 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FOXD4L1Q9NU39 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms