Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC027307.2-201ENST00000591252 911 ntBASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.67■□□□□ 0.58
PDLIM7Q9NR12 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 IGHV3-71-201ENST00000523324 359 ntBASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 AC013467.2-201ENST00000605472 835 ntBASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.66■□□□□ 0.58
PDLIM7Q9NR12 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PDLIM7Q9NR12 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDLIM7Q9NR12 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDLIM7Q9NR12 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDLIM7Q9NR12 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDLIM7Q9NR12 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.64■□□□□ 0.57
PDLIM7Q9NR12 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDLIM7Q9NR12 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDLIM7Q9NR12 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.64■□□□□ 0.57
PDLIM7Q9NR12 GPR53P-205ENST00000457298 1084 ntBASIC18.64■□□□□ 0.57
PDLIM7Q9NR12 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDLIM7Q9NR12 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.64■□□□□ 0.57
PDLIM7Q9NR12 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.64■□□□□ 0.57
PDLIM7Q9NR12 SPDYE12P-201ENST00000618416 771 ntBASIC18.64■□□□□ 0.57
PDLIM7Q9NR12 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDLIM7Q9NR12 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDLIM7Q9NR12 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDLIM7Q9NR12 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PDLIM7Q9NR12 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDLIM7Q9NR12 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDLIM7Q9NR12 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDLIM7Q9NR12 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDLIM7Q9NR12 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms