Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GCM1Q9NP62 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
GCM1Q9NP62 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GCM1Q9NP62 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GCM1Q9NP62 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
GCM1Q9NP62 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GCM1Q9NP62 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
GCM1Q9NP62 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GCM1Q9NP62 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GCM1Q9NP62 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.39□□□□□ -0.11
GCM1Q9NP62 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GCM1Q9NP62 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.39□□□□□ -0.11
GCM1Q9NP62 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GCM1Q9NP62 AP001094.4-201ENST00000579008 2176 ntBASIC14.39□□□□□ -0.11
GCM1Q9NP62 AC002310.6-201ENST00000624451 1377 ntBASIC14.39□□□□□ -0.11
GCM1Q9NP62 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.39□□□□□ -0.11
GCM1Q9NP62 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GCM1Q9NP62 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GCM1Q9NP62 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
GCM1Q9NP62 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
GCM1Q9NP62 PMS2P1-201ENST00000431037 1228 ntBASIC14.39□□□□□ -0.11
GCM1Q9NP62 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GCM1Q9NP62 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
GCM1Q9NP62 SLC25A6P2-201ENST00000497974 877 ntBASIC14.39□□□□□ -0.11
GCM1Q9NP62 KRT18P58-201ENST00000527480 1120 ntBASIC14.39□□□□□ -0.11
GCM1Q9NP62 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.39□□□□□ -0.11
GCM1Q9NP62 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.39□□□□□ -0.11
GCM1Q9NP62 OR7E47P-204ENST00000575924 449 ntBASIC14.39□□□□□ -0.11
GCM1Q9NP62 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.39□□□□□ -0.11
GCM1Q9NP62 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GCM1Q9NP62 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.39□□□□□ -0.11
GCM1Q9NP62 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.39□□□□□ -0.11
GCM1Q9NP62 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
GCM1Q9NP62 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.39□□□□□ -0.11
GCM1Q9NP62 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GCM1Q9NP62 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GCM1Q9NP62 MIR600HG-201ENST00000449175 5984 ntBASIC14.39□□□□□ -0.11
GCM1Q9NP62 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.39□□□□□ -0.11
GCM1Q9NP62 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GCM1Q9NP62 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
GCM1Q9NP62 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
GCM1Q9NP62 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
GCM1Q9NP62 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GCM1Q9NP62 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
GCM1Q9NP62 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GCM1Q9NP62 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GCM1Q9NP62 AC099398.1-201ENST00000567919 2776 ntBASIC14.39□□□□□ -0.11
GCM1Q9NP62 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
GCM1Q9NP62 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GCM1Q9NP62 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.39□□□□□ -0.11
GCM1Q9NP62 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
GCM1Q9NP62 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GCM1Q9NP62 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GCM1Q9NP62 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.38□□□□□ -0.11
GCM1Q9NP62 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.38□□□□□ -0.11
GCM1Q9NP62 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.38□□□□□ -0.11
GCM1Q9NP62 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.38□□□□□ -0.11
GCM1Q9NP62 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
GCM1Q9NP62 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GCM1Q9NP62 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GCM1Q9NP62 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GCM1Q9NP62 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GCM1Q9NP62 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GCM1Q9NP62 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GCM1Q9NP62 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GCM1Q9NP62 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
GCM1Q9NP62 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
GCM1Q9NP62 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
GCM1Q9NP62 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.38□□□□□ -0.11
GCM1Q9NP62 MED15P5-201ENST00000423150 992 ntBASIC14.38□□□□□ -0.11
GCM1Q9NP62 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
GCM1Q9NP62 AC007967.2-201ENST00000432613 625 ntBASIC14.38□□□□□ -0.11
GCM1Q9NP62 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.38□□□□□ -0.11
GCM1Q9NP62 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
GCM1Q9NP62 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.38□□□□□ -0.11
GCM1Q9NP62 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.38□□□□□ -0.11
GCM1Q9NP62 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.38□□□□□ -0.11
GCM1Q9NP62 FAM197Y3-203ENST00000618346 717 ntBASIC14.38□□□□□ -0.11
GCM1Q9NP62 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GCM1Q9NP62 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GCM1Q9NP62 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GCM1Q9NP62 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GCM1Q9NP62 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.38□□□□□ -0.11
GCM1Q9NP62 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GCM1Q9NP62 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.38□□□□□ -0.11
GCM1Q9NP62 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GCM1Q9NP62 AC129492.6-201ENST00000611383 1305 ntBASIC14.38□□□□□ -0.11
GCM1Q9NP62 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.38□□□□□ -0.11
GCM1Q9NP62 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.38□□□□□ -0.11
GCM1Q9NP62 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.38□□□□□ -0.11
GCM1Q9NP62 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GCM1Q9NP62 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.38□□□□□ -0.11
GCM1Q9NP62 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
GCM1Q9NP62 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.37□□□□□ -0.11
GCM1Q9NP62 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
GCM1Q9NP62 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GCM1Q9NP62 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.37□□□□□ -0.11
GCM1Q9NP62 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
GCM1Q9NP62 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
GCM1Q9NP62 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms