Protein–RNA interactions for Protein: Q9HD34

LYRM4, LYR motif-containing protein 4, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4Q9HD34 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYRM4Q9HD34 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYRM4Q9HD34 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LYRM4Q9HD34 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYRM4Q9HD34 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 PMS2P7-201ENST00000506558 1336 ntBASIC15.78■□□□□ 0.12
LYRM4Q9HD34 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 POLD2P1-201ENST00000511220 997 ntBASIC15.78■□□□□ 0.12
LYRM4Q9HD34 PGAM5P1-201ENST00000518923 814 ntBASIC15.78■□□□□ 0.12
LYRM4Q9HD34 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 AC109635.5-201ENST00000533593 962 ntBASIC15.78■□□□□ 0.12
LYRM4Q9HD34 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 AL513190.1-201ENST00000621254 727 ntBASIC15.78■□□□□ 0.12
LYRM4Q9HD34 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LYRM4Q9HD34 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LYRM4Q9HD34 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LYRM4Q9HD34 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LYRM4Q9HD34 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LYRM4Q9HD34 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LYRM4Q9HD34 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LYRM4Q9HD34 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.77■□□□□ 0.12
LYRM4Q9HD34 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
LYRM4Q9HD34 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LYRM4Q9HD34 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LYRM4Q9HD34 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
LYRM4Q9HD34 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LYRM4Q9HD34 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LYRM4Q9HD34 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
LYRM4Q9HD34 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
LYRM4Q9HD34 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LYRM4Q9HD34 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LYRM4Q9HD34 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.77■□□□□ 0.12
LYRM4Q9HD34 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.77■□□□□ 0.12
LYRM4Q9HD34 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LYRM4Q9HD34 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.77■□□□□ 0.12
LYRM4Q9HD34 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LYRM4Q9HD34 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.77■□□□□ 0.12
LYRM4Q9HD34 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.77■□□□□ 0.12
LYRM4Q9HD34 AC002347.1-201ENST00000569543 541 ntBASIC15.77■□□□□ 0.12
LYRM4Q9HD34 AC068137.2-201ENST00000605408 478 ntBASIC15.77■□□□□ 0.12
LYRM4Q9HD34 AC092865.6-201ENST00000642101 219 ntBASIC15.77■□□□□ 0.12
LYRM4Q9HD34 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.77■□□□□ 0.12
LYRM4Q9HD34 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
LYRM4Q9HD34 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LYRM4Q9HD34 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LYRM4Q9HD34 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LYRM4Q9HD34 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.77■□□□□ 0.11
LYRM4Q9HD34 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.77■□□□□ 0.11
LYRM4Q9HD34 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
LYRM4Q9HD34 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LYRM4Q9HD34 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LYRM4Q9HD34 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LYRM4Q9HD34 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.76■□□□□ 0.11
LYRM4Q9HD34 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYRM4Q9HD34 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
LYRM4Q9HD34 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.76■□□□□ 0.11
LYRM4Q9HD34 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
LYRM4Q9HD34 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
LYRM4Q9HD34 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.76■□□□□ 0.11
LYRM4Q9HD34 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYRM4Q9HD34 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LYRM4Q9HD34 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.76■□□□□ 0.11
LYRM4Q9HD34 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.76■□□□□ 0.11
LYRM4Q9HD34 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.76■□□□□ 0.11
LYRM4Q9HD34 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYRM4Q9HD34 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
LYRM4Q9HD34 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms