Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
COMMD4Q9H0A8 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
COMMD4Q9H0A8 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COMMD4Q9H0A8 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COMMD4Q9H0A8 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COMMD4Q9H0A8 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COMMD4Q9H0A8 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
COMMD4Q9H0A8 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COMMD4Q9H0A8 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
COMMD4Q9H0A8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COMMD4Q9H0A8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.92□□□□□ -0.02
COMMD4Q9H0A8 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COMMD4Q9H0A8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
COMMD4Q9H0A8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COMMD4Q9H0A8 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COMMD4Q9H0A8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.92□□□□□ -0.02
COMMD4Q9H0A8 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COMMD4Q9H0A8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
COMMD4Q9H0A8 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 ACTG1P4-201ENST00000425123 1122 ntBASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 SIGLEC30P-201ENST00000455569 941 ntBASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COMMD4Q9H0A8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.9□□□□□ -0.02
COMMD4Q9H0A8 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD4Q9H0A8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms