Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PHACTR1Q9C0D0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 AL596087.1-201ENST00000400979 1969 ntBASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHACTR1Q9C0D0 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PHACTR1Q9C0D0 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
PHACTR1Q9C0D0 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PHACTR1Q9C0D0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PHACTR1Q9C0D0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PHACTR1Q9C0D0 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
PHACTR1Q9C0D0 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.08■□□□□ 0.33
PHACTR1Q9C0D0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PHACTR1Q9C0D0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PHACTR1Q9C0D0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
PHACTR1Q9C0D0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.08■□□□□ 0.33
PHACTR1Q9C0D0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PHACTR1Q9C0D0 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHACTR1Q9C0D0 NCF1C-201ENST00000438382 1427 ntBASIC17.08■□□□□ 0.32
PHACTR1Q9C0D0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PHACTR1Q9C0D0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHACTR1Q9C0D0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PHACTR1Q9C0D0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.08■□□□□ 0.32
PHACTR1Q9C0D0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHACTR1Q9C0D0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHACTR1Q9C0D0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.08■□□□□ 0.32
PHACTR1Q9C0D0 MIR4492-201ENST00000581627 80 ntBASIC17.08■□□□□ 0.32
PHACTR1Q9C0D0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.08■□□□□ 0.32
PHACTR1Q9C0D0 AP002414.4-201ENST00000589764 1148 ntBASIC17.08■□□□□ 0.32
PHACTR1Q9C0D0 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.08■□□□□ 0.32
PHACTR1Q9C0D0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.08■□□□□ 0.32
PHACTR1Q9C0D0 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.08■□□□□ 0.32
PHACTR1Q9C0D0 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHACTR1Q9C0D0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.08■□□□□ 0.32
PHACTR1Q9C0D0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.08■□□□□ 0.32
PHACTR1Q9C0D0 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PHACTR1Q9C0D0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHACTR1Q9C0D0 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PHACTR1Q9C0D0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PHACTR1Q9C0D0 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 GGT4P-201ENST00000623672 1708 ntBASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.07■□□□□ 0.32
PHACTR1Q9C0D0 PAWRP1-201ENST00000451083 565 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms