Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 AC009407.1-201ENST00000568958 598 ntBASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 SPTSSB-204ENST00000617024 1292 ntBASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2OQ9C0C9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 AC087499.6-201ENST00000411576 835 ntBASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 AL135999.2-201ENST00000622438 1686 ntBASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBE2OQ9C0C9 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.54
UBE2OQ9C0C9 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.46■□□□□ 0.54
UBE2OQ9C0C9 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBE2OQ9C0C9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBE2OQ9C0C9 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.45■□□□□ 0.54
UBE2OQ9C0C9 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBE2OQ9C0C9 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBE2OQ9C0C9 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBE2OQ9C0C9 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBE2OQ9C0C9 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBE2OQ9C0C9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.45■□□□□ 0.54
UBE2OQ9C0C9 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBE2OQ9C0C9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBE2OQ9C0C9 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBE2OQ9C0C9 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.45■□□□□ 0.54
UBE2OQ9C0C9 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBE2OQ9C0C9 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
UBE2OQ9C0C9 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
UBE2OQ9C0C9 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
UBE2OQ9C0C9 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.45■□□□□ 0.54
UBE2OQ9C0C9 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBE2OQ9C0C9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.45■□□□□ 0.54
UBE2OQ9C0C9 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms