Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTNAP4Q9C0A0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CNTNAP4Q9C0A0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTNAP4Q9C0A0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 MYCLP2-201ENST00000449268 967 ntBASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 AL589987.1-201ENST00000453380 819 ntBASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 AC119751.2-201ENST00000504529 210 ntBASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 CTBP2P3-201ENST00000585629 1255 ntBASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.88■□□□□ 0.93
CNTNAP4Q9C0A0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP4Q9C0A0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP4Q9C0A0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP4Q9C0A0 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP4Q9C0A0 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP4Q9C0A0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP4Q9C0A0 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP4Q9C0A0 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC20.87■□□□□ 0.93
CNTNAP4Q9C0A0 TMEM14DP-201ENST00000422205 345 ntBASIC20.87■□□□□ 0.93
CNTNAP4Q9C0A0 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC20.87■□□□□ 0.93
CNTNAP4Q9C0A0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CNTNAP4Q9C0A0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
CNTNAP4Q9C0A0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC20.87■□□□□ 0.93
CNTNAP4Q9C0A0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC20.87■□□□□ 0.93
CNTNAP4Q9C0A0 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC20.87■□□□□ 0.93
CNTNAP4Q9C0A0 AL139011.1-202ENST00000642063 584 ntBASIC20.87■□□□□ 0.93
CNTNAP4Q9C0A0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP4Q9C0A0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP4Q9C0A0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.87■□□□□ 0.93
CNTNAP4Q9C0A0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC20.87■□□□□ 0.93
CNTNAP4Q9C0A0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.87■□□□□ 0.93
CNTNAP4Q9C0A0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP4Q9C0A0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP4Q9C0A0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CNTNAP4Q9C0A0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP4Q9C0A0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP4Q9C0A0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP4Q9C0A0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP4Q9C0A0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP4Q9C0A0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP4Q9C0A0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP4Q9C0A0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP4Q9C0A0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
CNTNAP4Q9C0A0 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP4Q9C0A0 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP4Q9C0A0 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CNTNAP4Q9C0A0 AC098850.1-201ENST00000419919 790 ntBASIC20.86■□□□□ 0.93
CNTNAP4Q9C0A0 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CNTNAP4Q9C0A0 AC123567.1-201ENST00000548294 1261 ntBASIC20.86■□□□□ 0.93
CNTNAP4Q9C0A0 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC20.86■□□□□ 0.93
CNTNAP4Q9C0A0 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC20.86■□□□□ 0.93
CNTNAP4Q9C0A0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CNTNAP4Q9C0A0 AL512343.1-201ENST00000605837 169 ntBASIC20.86■□□□□ 0.93
CNTNAP4Q9C0A0 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP4Q9C0A0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP4Q9C0A0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CNTNAP4Q9C0A0 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP4Q9C0A0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP4Q9C0A0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP4Q9C0A0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CNTNAP4Q9C0A0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.86■□□□□ 0.93
CNTNAP4Q9C0A0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP4Q9C0A0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP4Q9C0A0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP4Q9C0A0 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms