Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
UPF3BQ9BZI7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
UPF3BQ9BZI7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UPF3BQ9BZI7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
UPF3BQ9BZI7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.08■□□□□ 0.81
UPF3BQ9BZI7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.08■□□□□ 0.81
UPF3BQ9BZI7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC20.08■□□□□ 0.81
UPF3BQ9BZI7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
UPF3BQ9BZI7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC20.08■□□□□ 0.81
UPF3BQ9BZI7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
UPF3BQ9BZI7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UPF3BQ9BZI7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
UPF3BQ9BZI7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UPF3BQ9BZI7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.08■□□□□ 0.81
UPF3BQ9BZI7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.08■□□□□ 0.81
UPF3BQ9BZI7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
UPF3BQ9BZI7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.08■□□□□ 0.81
UPF3BQ9BZI7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.08■□□□□ 0.81
UPF3BQ9BZI7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
UPF3BQ9BZI7 SAPCD2P3-201ENST00000455031 850 ntBASIC20.08■□□□□ 0.81
UPF3BQ9BZI7 UNC93B7-201ENST00000509439 705 ntBASIC20.08■□□□□ 0.81
UPF3BQ9BZI7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.08■□□□□ 0.81
UPF3BQ9BZI7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.08■□□□□ 0.81
UPF3BQ9BZI7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.08■□□□□ 0.81
UPF3BQ9BZI7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
UPF3BQ9BZI7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC20.08■□□□□ 0.8
UPF3BQ9BZI7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
UPF3BQ9BZI7 AC006277.1-201ENST00000624348 1610 ntBASIC20.08■□□□□ 0.8
UPF3BQ9BZI7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UPF3BQ9BZI7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
UPF3BQ9BZI7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.08■□□□□ 0.8
UPF3BQ9BZI7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UPF3BQ9BZI7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
UPF3BQ9BZI7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC20.08■□□□□ 0.8
UPF3BQ9BZI7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.08■□□□□ 0.8
UPF3BQ9BZI7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UPF3BQ9BZI7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.08■□□□□ 0.8
UPF3BQ9BZI7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.08■□□□□ 0.8
UPF3BQ9BZI7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
UPF3BQ9BZI7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 IFNL4P1-201ENST00000607083 540 ntBASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
UPF3BQ9BZI7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UPF3BQ9BZI7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms