Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
PCGF1Q9BSM1 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 KRT18P13-201ENST00000400056 1290 ntBASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 PTCHD3P3-201ENST00000403073 906 ntBASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 CRYGEP-201ENST00000412192 528 ntBASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 ACTG1P4-201ENST00000425123 1122 ntBASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 AC108073.2-201ENST00000464002 357 ntBASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 AL353135.1-201ENST00000606729 504 ntBASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 GPR89P-201ENST00000407924 1495 ntBASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms