Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HDHD3Q9BSH5 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 AL021920.2-201ENST00000624828 1351 ntBASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 ME2P1-201ENST00000426028 1970 ntBASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 LINC00895-201ENST00000629028 1637 ntBASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 IGHV3-47-201ENST00000425060 335 ntBASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 AC074051.2-201ENST00000565115 352 ntBASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 AC114341.1-201ENST00000618070 349 ntBASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDHD3Q9BSH5 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 AC022188.1-201ENST00000620960 1664 ntBASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 AC006538.1-201ENST00000567905 1585 ntBASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 AP002414.1-201ENST00000391405 1147 ntBASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 AC116407.4-201ENST00000623319 1061 ntBASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms