Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC19.02■□□□□ 0.64
PTPN18Q99952 AC007389.4-201ENST00000454674 793 ntBASIC19.02■□□□□ 0.64
PTPN18Q99952 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN18Q99952 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC19.02■□□□□ 0.64
PTPN18Q99952 SDHAP3-202ENST00000515467 728 ntBASIC19.02■□□□□ 0.64
PTPN18Q99952 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC19.02■□□□□ 0.64
PTPN18Q99952 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC19.02■□□□□ 0.64
PTPN18Q99952 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN18Q99952 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
PTPN18Q99952 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN18Q99952 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN18Q99952 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN18Q99952 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN18Q99952 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.02■□□□□ 0.63
PTPN18Q99952 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
PTPN18Q99952 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PTPN18Q99952 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PTPN18Q99952 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PTPN18Q99952 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PTPN18Q99952 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.01■□□□□ 0.63
PTPN18Q99952 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN18Q99952 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN18Q99952 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PTPN18Q99952 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN18Q99952 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN18Q99952 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN18Q99952 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC19.01■□□□□ 0.63
PTPN18Q99952 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.01■□□□□ 0.63
PTPN18Q99952 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN18Q99952 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.01■□□□□ 0.63
PTPN18Q99952 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.01■□□□□ 0.63
PTPN18Q99952 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
PTPN18Q99952 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN18Q99952 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.01■□□□□ 0.63
PTPN18Q99952 SPDYE17-201ENST00000412399 783 ntBASIC19.01■□□□□ 0.63
PTPN18Q99952 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC19.01■□□□□ 0.63
PTPN18Q99952 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC19.01■□□□□ 0.63
PTPN18Q99952 SERBP1P3-201ENST00000459980 809 ntBASIC19.01■□□□□ 0.63
PTPN18Q99952 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PTPN18Q99952 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN18Q99952 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PTPN18Q99952 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN18Q99952 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.01■□□□□ 0.63
PTPN18Q99952 USB1-203ENST00000539737 1212 ntTSL 2 BASIC19.01■□□□□ 0.63
PTPN18Q99952 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN18Q99952 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.01■□□□□ 0.63
PTPN18Q99952 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC19.01■□□□□ 0.63
PTPN18Q99952 WNT11-204ENST00000621122 789 ntTSL 5 BASIC19.01■□□□□ 0.63
PTPN18Q99952 GPR182-203ENST00000622922 591 ntBASIC19.01■□□□□ 0.63
PTPN18Q99952 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN18Q99952 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN18Q99952 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN18Q99952 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PTPN18Q99952 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN18Q99952 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.01■□□□□ 0.63
PTPN18Q99952 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.01■□□□□ 0.63
PTPN18Q99952 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN18Q99952 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN18Q99952 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PTPN18Q99952 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.01■□□□□ 0.63
PTPN18Q99952 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN18Q99952 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN18Q99952 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19■□□□□ 0.63
PTPN18Q99952 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC19■□□□□ 0.63
PTPN18Q99952 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PTPN18Q99952 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN18Q99952 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTPN18Q99952 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PTPN18Q99952 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19■□□□□ 0.63
PTPN18Q99952 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19■□□□□ 0.63
PTPN18Q99952 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19■□□□□ 0.63
PTPN18Q99952 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC19■□□□□ 0.63
PTPN18Q99952 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC19■□□□□ 0.63
PTPN18Q99952 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19■□□□□ 0.63
PTPN18Q99952 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC19■□□□□ 0.63
PTPN18Q99952 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC19■□□□□ 0.63
PTPN18Q99952 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN18Q99952 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PTPN18Q99952 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC19■□□□□ 0.63
PTPN18Q99952 AC093726.1-201ENST00000608064 963 ntBASIC19■□□□□ 0.63
PTPN18Q99952 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19■□□□□ 0.63
PTPN18Q99952 PFAS-212ENST00000625942 396 ntTSL 5 BASIC19■□□□□ 0.63
PTPN18Q99952 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN18Q99952 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN18Q99952 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PTPN18Q99952 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19■□□□□ 0.63
PTPN18Q99952 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN18Q99952 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PTPN18Q99952 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PTPN18Q99952 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19■□□□□ 0.63
PTPN18Q99952 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN18Q99952 AC004408.2-201ENST00000623613 2777 ntBASIC19■□□□□ 0.63
PTPN18Q99952 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19■□□□□ 0.63
PTPN18Q99952 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN18Q99952 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN18Q99952 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19■□□□□ 0.63
PTPN18Q99952 AL133338.1-201ENST00000565695 1517 ntBASIC19■□□□□ 0.63
PTPN18Q99952 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN18Q99952 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.99■□□□□ 0.63
PTPN18Q99952 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms