Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.83■□□□□ 0.28
CPNE1Q99829 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE1Q99829 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE1Q99829 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE1Q99829 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE1Q99829 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE1Q99829 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
CPNE1Q99829 AC005052.1-201ENST00000625181 2492 ntBASIC16.82■□□□□ 0.28
CPNE1Q99829 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE1Q99829 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE1Q99829 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE1Q99829 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE1Q99829 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.82■□□□□ 0.28
CPNE1Q99829 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE1Q99829 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CPNE1Q99829 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE1Q99829 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.82■□□□□ 0.28
CPNE1Q99829 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE1Q99829 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.82■□□□□ 0.28
CPNE1Q99829 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE1Q99829 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.82■□□□□ 0.28
CPNE1Q99829 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE1Q99829 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE1Q99829 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE1Q99829 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE1Q99829 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE1Q99829 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE1Q99829 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE1Q99829 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.82■□□□□ 0.28
CPNE1Q99829 FOSL1P1-201ENST00000511041 816 ntBASIC16.82■□□□□ 0.28
CPNE1Q99829 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CPNE1Q99829 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.82■□□□□ 0.28
CPNE1Q99829 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.82■□□□□ 0.28
CPNE1Q99829 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.82■□□□□ 0.28
CPNE1Q99829 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE1Q99829 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE1Q99829 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE1Q99829 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.82■□□□□ 0.28
CPNE1Q99829 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CPNE1Q99829 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
CPNE1Q99829 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE1Q99829 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE1Q99829 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE1Q99829 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE1Q99829 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.82■□□□□ 0.28
CPNE1Q99829 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE1Q99829 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CPNE1Q99829 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.82■□□□□ 0.28
CPNE1Q99829 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.82■□□□□ 0.28
CPNE1Q99829 SNX33P1-201ENST00000592116 1762 ntBASIC16.82■□□□□ 0.28
CPNE1Q99829 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE1Q99829 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.81■□□□□ 0.28
CPNE1Q99829 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE1Q99829 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.81■□□□□ 0.28
CPNE1Q99829 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.81■□□□□ 0.28
CPNE1Q99829 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.81■□□□□ 0.28
CPNE1Q99829 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE1Q99829 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE1Q99829 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE1Q99829 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE1Q99829 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE1Q99829 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CPNE1Q99829 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.81■□□□□ 0.28
CPNE1Q99829 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CPNE1Q99829 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.81■□□□□ 0.28
CPNE1Q99829 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.81■□□□□ 0.28
CPNE1Q99829 MPDU1-223ENST00000582151 728 ntBASIC16.81■□□□□ 0.28
CPNE1Q99829 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.81■□□□□ 0.28
CPNE1Q99829 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE1Q99829 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE1Q99829 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE1Q99829 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE1Q99829 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE1Q99829 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.81■□□□□ 0.28
CPNE1Q99829 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE1Q99829 AC008741.2-201ENST00000612792 3115 ntBASIC16.81■□□□□ 0.28
CPNE1Q99829 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CPNE1Q99829 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE1Q99829 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE1Q99829 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE1Q99829 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.8■□□□□ 0.28
CPNE1Q99829 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.8■□□□□ 0.28
CPNE1Q99829 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CPNE1Q99829 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.8■□□□□ 0.28
CPNE1Q99829 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE1Q99829 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.8■□□□□ 0.28
CPNE1Q99829 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE1Q99829 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.8■□□□□ 0.28
CPNE1Q99829 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
CPNE1Q99829 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.8■□□□□ 0.28
CPNE1Q99829 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.8■□□□□ 0.28
CPNE1Q99829 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CPNE1Q99829 KRT18P35-201ENST00000510488 1269 ntBASIC16.8■□□□□ 0.28
CPNE1Q99829 AC139887.3-201ENST00000568585 713 ntBASIC16.8■□□□□ 0.28
CPNE1Q99829 MIR4492-201ENST00000581627 80 ntBASIC16.8■□□□□ 0.28
CPNE1Q99829 MTDHP3-201ENST00000594186 672 ntBASIC16.8■□□□□ 0.28
CPNE1Q99829 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.8■□□□□ 0.28
CPNE1Q99829 AL732292.2-201ENST00000609649 430 ntBASIC16.8■□□□□ 0.28
CPNE1Q99829 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CPNE1Q99829 AC093458.2-201ENST00000623150 629 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms