Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 PARP8-218ENST00000513738 596 ntTSL 4 BASIC21.94■■□□□ 1.1
ABCA3Q99758 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC21.94■■□□□ 1.1
ABCA3Q99758 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC21.94■■□□□ 1.1
ABCA3Q99758 AC009542.2-202ENST00000619004 1067 ntBASIC21.94■■□□□ 1.1
ABCA3Q99758 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC21.94■■□□□ 1.1
ABCA3Q99758 KRT8P39-201ENST00000396270 1433 ntBASIC21.94■■□□□ 1.1
ABCA3Q99758 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.94■■□□□ 1.1
ABCA3Q99758 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
ABCA3Q99758 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
ABCA3Q99758 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
ABCA3Q99758 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ABCA3Q99758 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ABCA3Q99758 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC21.93■■□□□ 1.1
ABCA3Q99758 AL589702.1-201ENST00000641229 1509 ntBASIC21.93■■□□□ 1.1
ABCA3Q99758 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC21.93■■□□□ 1.1
ABCA3Q99758 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC21.93■■□□□ 1.1
ABCA3Q99758 HIST3H2BA-201ENST00000436555 524 ntBASIC21.93■■□□□ 1.1
ABCA3Q99758 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC21.93■■□□□ 1.1
ABCA3Q99758 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC21.93■■□□□ 1.1
ABCA3Q99758 AC124283.3-201ENST00000570869 594 ntBASIC21.93■■□□□ 1.1
ABCA3Q99758 GNRHR2-203ENST00000581100 1187 ntBASIC21.93■■□□□ 1.1
ABCA3Q99758 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC21.93■■□□□ 1.1
ABCA3Q99758 MIR6069-201ENST00000620069 79 ntBASIC21.93■■□□□ 1.1
ABCA3Q99758 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC21.93■■□□□ 1.1
ABCA3Q99758 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ABCA3Q99758 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.93■■□□□ 1.1
ABCA3Q99758 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC21.93■■□□□ 1.1
ABCA3Q99758 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ABCA3Q99758 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
ABCA3Q99758 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC21.93■■□□□ 1.1
ABCA3Q99758 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ABCA3Q99758 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
ABCA3Q99758 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ABCA3Q99758 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ABCA3Q99758 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
ABCA3Q99758 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ABCA3Q99758 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ABCA3Q99758 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC21.92■■□□□ 1.1
ABCA3Q99758 AL442647.2-201ENST00000429864 857 ntBASIC21.92■■□□□ 1.1
ABCA3Q99758 RNA5SP412-201ENST00000516234 123 ntBASIC21.92■■□□□ 1.1
ABCA3Q99758 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC21.92■■□□□ 1.1
ABCA3Q99758 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
ABCA3Q99758 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC21.92■■□□□ 1.1
ABCA3Q99758 BRI3BPP1-201ENST00000594224 787 ntBASIC21.92■■□□□ 1.1
ABCA3Q99758 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ABCA3Q99758 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC21.92■■□□□ 1.1
ABCA3Q99758 AC093525.8-201ENST00000624099 1342 ntBASIC21.92■■□□□ 1.1
ABCA3Q99758 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC21.92■■□□□ 1.1
ABCA3Q99758 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC21.92■■□□□ 1.1
ABCA3Q99758 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ABCA3Q99758 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ABCA3Q99758 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ABCA3Q99758 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
ABCA3Q99758 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
ABCA3Q99758 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
ABCA3Q99758 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC21.92■■□□□ 1.1
ABCA3Q99758 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC21.92■■□□□ 1.1
ABCA3Q99758 PIGL-212ENST00000581006 554 ntTSL 4 BASIC21.92■■□□□ 1.1
ABCA3Q99758 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
ABCA3Q99758 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC21.92■■□□□ 1.1
ABCA3Q99758 AMT-232ENST00000636199 1546 ntTSL 5 BASIC21.91■■□□□ 1.1
ABCA3Q99758 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.91■■□□□ 1.1
ABCA3Q99758 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC21.91■■□□□ 1.1
ABCA3Q99758 BOC-212ENST00000485230 2173 ntTSL 2 BASIC21.91■■□□□ 1.1
ABCA3Q99758 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
ABCA3Q99758 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ABCA3Q99758 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ABCA3Q99758 LBX2-201ENST00000341396 886 ntTSL 3 BASIC21.91■■□□□ 1.1
ABCA3Q99758 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ABCA3Q99758 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC21.91■■□□□ 1.1
ABCA3Q99758 HAUS4P1-201ENST00000406739 1145 ntBASIC21.91■■□□□ 1.1
ABCA3Q99758 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC21.91■■□□□ 1.1
ABCA3Q99758 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC21.91■■□□□ 1.1
ABCA3Q99758 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC21.91■■□□□ 1.1
ABCA3Q99758 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ABCA3Q99758 AC068587.3-201ENST00000526613 355 ntBASIC21.91■■□□□ 1.1
ABCA3Q99758 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC21.91■■□□□ 1.1
ABCA3Q99758 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC21.91■■□□□ 1.1
ABCA3Q99758 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC21.91■■□□□ 1.1
ABCA3Q99758 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
ABCA3Q99758 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ABCA3Q99758 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.9■■□□□ 1.1
ABCA3Q99758 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ABCA3Q99758 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ABCA3Q99758 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ABCA3Q99758 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
ABCA3Q99758 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ABCA3Q99758 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
ABCA3Q99758 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ABCA3Q99758 NME6-203ENST00000415644 849 ntTSL 2 BASIC21.9■■□□□ 1.1
ABCA3Q99758 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
ABCA3Q99758 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC21.9■■□□□ 1.1
ABCA3Q99758 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC21.9■■□□□ 1.1
ABCA3Q99758 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC21.9■■□□□ 1.1
ABCA3Q99758 CYP4F24P-201ENST00000586049 1580 ntBASIC21.9■■□□□ 1.1
ABCA3Q99758 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC21.9■■□□□ 1.1
ABCA3Q99758 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ABCA3Q99758 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ABCA3Q99758 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ABCA3Q99758 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms