Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.53■□□□□ 0.72
CDK5RAP2Q96SN8 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
CDK5RAP2Q96SN8 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDK5RAP2Q96SN8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDK5RAP2Q96SN8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.53■□□□□ 0.72
CDK5RAP2Q96SN8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDK5RAP2Q96SN8 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CDK5RAP2Q96SN8 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CDK5RAP2Q96SN8 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDK5RAP2Q96SN8 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDK5RAP2Q96SN8 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDK5RAP2Q96SN8 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.53■□□□□ 0.72
CDK5RAP2Q96SN8 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.53■□□□□ 0.72
CDK5RAP2Q96SN8 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.53■□□□□ 0.72
CDK5RAP2Q96SN8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.53■□□□□ 0.72
CDK5RAP2Q96SN8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDK5RAP2Q96SN8 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDK5RAP2Q96SN8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDK5RAP2Q96SN8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDK5RAP2Q96SN8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDK5RAP2Q96SN8 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.53■□□□□ 0.72
CDK5RAP2Q96SN8 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CDK5RAP2Q96SN8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.52■□□□□ 0.72
CDK5RAP2Q96SN8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDK5RAP2Q96SN8 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDK5RAP2Q96SN8 AC027369.6-201ENST00000525520 931 ntBASIC19.52■□□□□ 0.72
CDK5RAP2Q96SN8 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.72
CDK5RAP2Q96SN8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.52■□□□□ 0.72
CDK5RAP2Q96SN8 LINC02560-201ENST00000596379 459 ntBASIC19.52■□□□□ 0.72
CDK5RAP2Q96SN8 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.52■□□□□ 0.72
CDK5RAP2Q96SN8 AL391256.1-201ENST00000443260 1855 ntBASIC19.52■□□□□ 0.72
CDK5RAP2Q96SN8 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.52■□□□□ 0.72
CDK5RAP2Q96SN8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.52■□□□□ 0.72
CDK5RAP2Q96SN8 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDK5RAP2Q96SN8 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDK5RAP2Q96SN8 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.52■□□□□ 0.72
CDK5RAP2Q96SN8 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.52■□□□□ 0.72
CDK5RAP2Q96SN8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDK5RAP2Q96SN8 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDK5RAP2Q96SN8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDK5RAP2Q96SN8 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CDK5RAP2Q96SN8 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.52■□□□□ 0.72
CDK5RAP2Q96SN8 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDK5RAP2Q96SN8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDK5RAP2Q96SN8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.52■□□□□ 0.72
CDK5RAP2Q96SN8 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDK5RAP2Q96SN8 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDK5RAP2Q96SN8 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.52■□□□□ 0.71
CDK5RAP2Q96SN8 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CDK5RAP2Q96SN8 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CDK5RAP2Q96SN8 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CDK5RAP2Q96SN8 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.52■□□□□ 0.71
CDK5RAP2Q96SN8 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.52■□□□□ 0.71
CDK5RAP2Q96SN8 WASH4P-201ENST00000564273 1246 ntBASIC19.52■□□□□ 0.71
CDK5RAP2Q96SN8 AC024267.1-201ENST00000582320 895 ntBASIC19.52■□□□□ 0.71
CDK5RAP2Q96SN8 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CDK5RAP2Q96SN8 AC020765.3-201ENST00000613051 740 ntBASIC19.52■□□□□ 0.71
CDK5RAP2Q96SN8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.52■□□□□ 0.71
CDK5RAP2Q96SN8 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.52■□□□□ 0.71
CDK5RAP2Q96SN8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDK5RAP2Q96SN8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.51■□□□□ 0.71
CDK5RAP2Q96SN8 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDK5RAP2Q96SN8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDK5RAP2Q96SN8 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDK5RAP2Q96SN8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.51■□□□□ 0.71
CDK5RAP2Q96SN8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
CDK5RAP2Q96SN8 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.51■□□□□ 0.71
CDK5RAP2Q96SN8 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDK5RAP2Q96SN8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CDK5RAP2Q96SN8 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.51■□□□□ 0.71
CDK5RAP2Q96SN8 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDK5RAP2Q96SN8 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.51■□□□□ 0.71
CDK5RAP2Q96SN8 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.51■□□□□ 0.71
CDK5RAP2Q96SN8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.51■□□□□ 0.71
CDK5RAP2Q96SN8 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDK5RAP2Q96SN8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDK5RAP2Q96SN8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CDK5RAP2Q96SN8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDK5RAP2Q96SN8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDK5RAP2Q96SN8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDK5RAP2Q96SN8 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.51■□□□□ 0.71
CDK5RAP2Q96SN8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms