Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 KRT8P39-201ENST00000396270 1433 ntBASIC19.89■□□□□ 0.77
NEK1Q96PY6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
NEK1Q96PY6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
NEK1Q96PY6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEK1Q96PY6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.89■□□□□ 0.77
NEK1Q96PY6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEK1Q96PY6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEK1Q96PY6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.89■□□□□ 0.77
NEK1Q96PY6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.89■□□□□ 0.77
NEK1Q96PY6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEK1Q96PY6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
NEK1Q96PY6 MIR4751-201ENST00000578027 74 ntBASIC19.89■□□□□ 0.77
NEK1Q96PY6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.89■□□□□ 0.77
NEK1Q96PY6 ACTL9-202ENST00000612068 1252 ntBASIC19.89■□□□□ 0.77
NEK1Q96PY6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
NEK1Q96PY6 AL512652.2-201ENST00000625156 1716 ntBASIC19.89■□□□□ 0.77
NEK1Q96PY6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.89■□□□□ 0.77
NEK1Q96PY6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEK1Q96PY6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEK1Q96PY6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEK1Q96PY6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.88■□□□□ 0.77
NEK1Q96PY6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.88■□□□□ 0.77
NEK1Q96PY6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.88■□□□□ 0.77
NEK1Q96PY6 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.88■□□□□ 0.77
NEK1Q96PY6 ALOX12P2-203ENST00000570921 1945 ntBASIC19.88■□□□□ 0.77
NEK1Q96PY6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
NEK1Q96PY6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.88■□□□□ 0.77
NEK1Q96PY6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NEK1Q96PY6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEK1Q96PY6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEK1Q96PY6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NEK1Q96PY6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEK1Q96PY6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
NEK1Q96PY6 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.88■□□□□ 0.77
NEK1Q96PY6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NEK1Q96PY6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.88■□□□□ 0.77
NEK1Q96PY6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.88■□□□□ 0.77
NEK1Q96PY6 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.88■□□□□ 0.77
NEK1Q96PY6 AC087641.1-201ENST00000557561 1021 ntBASIC19.88■□□□□ 0.77
NEK1Q96PY6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.88■□□□□ 0.77
NEK1Q96PY6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.88■□□□□ 0.77
NEK1Q96PY6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEK1Q96PY6 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.88■□□□□ 0.77
NEK1Q96PY6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEK1Q96PY6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.88■□□□□ 0.77
NEK1Q96PY6 AC023511.2-201ENST00000618803 211 ntBASIC19.88■□□□□ 0.77
NEK1Q96PY6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NEK1Q96PY6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.88■□□□□ 0.77
NEK1Q96PY6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEK1Q96PY6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
NEK1Q96PY6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
NEK1Q96PY6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.88■□□□□ 0.77
NEK1Q96PY6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEK1Q96PY6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEK1Q96PY6 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEK1Q96PY6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEK1Q96PY6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
NEK1Q96PY6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
NEK1Q96PY6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
NEK1Q96PY6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NEK1Q96PY6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.87■□□□□ 0.77
NEK1Q96PY6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NEK1Q96PY6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEK1Q96PY6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
NEK1Q96PY6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEK1Q96PY6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEK1Q96PY6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.87■□□□□ 0.77
NEK1Q96PY6 AL022342.1-201ENST00000400363 863 ntBASIC19.87■□□□□ 0.77
NEK1Q96PY6 HCG4-201ENST00000418983 998 ntBASIC19.87■□□□□ 0.77
NEK1Q96PY6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
NEK1Q96PY6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.87■□□□□ 0.77
NEK1Q96PY6 VN2R19P-201ENST00000442399 1052 ntBASIC19.87■□□□□ 0.77
NEK1Q96PY6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.87■□□□□ 0.77
NEK1Q96PY6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
NEK1Q96PY6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.87■□□□□ 0.77
NEK1Q96PY6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.87■□□□□ 0.77
NEK1Q96PY6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
NEK1Q96PY6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
NEK1Q96PY6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.87■□□□□ 0.77
NEK1Q96PY6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.87■□□□□ 0.77
NEK1Q96PY6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEK1Q96PY6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NEK1Q96PY6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NEK1Q96PY6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
NEK1Q96PY6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEK1Q96PY6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEK1Q96PY6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.87■□□□□ 0.77
NEK1Q96PY6 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEK1Q96PY6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NEK1Q96PY6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
NEK1Q96PY6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NEK1Q96PY6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.86■□□□□ 0.77
NEK1Q96PY6 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEK1Q96PY6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEK1Q96PY6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.86■□□□□ 0.77
NEK1Q96PY6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.86■□□□□ 0.77
NEK1Q96PY6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEK1Q96PY6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.86■□□□□ 0.77
NEK1Q96PY6 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEK1Q96PY6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms