Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 MIR661-201ENST00000384842 89 ntBASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 AC015922.1-201ENST00000421102 1152 ntBASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 AC245100.3-201ENST00000441281 285 ntBASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 UGT1A2P-201ENST00000454886 866 ntBASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 CROCCP2-202ENST00000412962 2773 ntBASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 AC063926.2-201ENST00000623766 1308 ntBASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 AL645608.8-201ENST00000606034 2086 ntBASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 PRORSD1P-202ENST00000563365 2154 ntBASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNGAP1Q96PV0 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYNGAP1Q96PV0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
SYNGAP1Q96PV0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.02■□□□□ 0.64
SYNGAP1Q96PV0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYNGAP1Q96PV0 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.02■□□□□ 0.64
SYNGAP1Q96PV0 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.02■□□□□ 0.64
SYNGAP1Q96PV0 IGHV3-42-201ENST00000520410 361 ntBASIC19.02■□□□□ 0.64
SYNGAP1Q96PV0 MPDU1-223ENST00000582151 728 ntBASIC19.02■□□□□ 0.64
SYNGAP1Q96PV0 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.02■□□□□ 0.64
SYNGAP1Q96PV0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.02■□□□□ 0.64
SYNGAP1Q96PV0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.02■□□□□ 0.64
SYNGAP1Q96PV0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
SYNGAP1Q96PV0 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.02■□□□□ 0.64
SYNGAP1Q96PV0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYNGAP1Q96PV0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYNGAP1Q96PV0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
SYNGAP1Q96PV0 AC016027.1-202ENST00000607927 1699 ntBASIC19.02■□□□□ 0.64
SYNGAP1Q96PV0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.02■□□□□ 0.64
SYNGAP1Q96PV0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SYNGAP1Q96PV0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYNGAP1Q96PV0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.02■□□□□ 0.64
SYNGAP1Q96PV0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.02■□□□□ 0.64
SYNGAP1Q96PV0 AC131009.4-201ENST00000624048 1740 ntBASIC19.02■□□□□ 0.64
SYNGAP1Q96PV0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.02■□□□□ 0.64
SYNGAP1Q96PV0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.02■□□□□ 0.64
SYNGAP1Q96PV0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYNGAP1Q96PV0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYNGAP1Q96PV0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
SYNGAP1Q96PV0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SYNGAP1Q96PV0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.02■□□□□ 0.63
SYNGAP1Q96PV0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SYNGAP1Q96PV0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SYNGAP1Q96PV0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 AC097493.3-201ENST00000509725 367 ntBASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 FRMD8P1-201ENST00000440433 1524 ntBASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNGAP1Q96PV0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms