Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SHDQ96IW2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHDQ96IW2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SHDQ96IW2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SHDQ96IW2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SHDQ96IW2 SLC7A15P-201ENST00000424028 1363 ntBASIC16.83■□□□□ 0.28
SHDQ96IW2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.83■□□□□ 0.28
SHDQ96IW2 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.83■□□□□ 0.28
SHDQ96IW2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SHDQ96IW2 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHDQ96IW2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SHDQ96IW2 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.83■□□□□ 0.28
SHDQ96IW2 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHDQ96IW2 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHDQ96IW2 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.83■□□□□ 0.28
SHDQ96IW2 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHDQ96IW2 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SHDQ96IW2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SHDQ96IW2 CHCHD2P3-201ENST00000603038 451 ntBASIC16.83■□□□□ 0.28
SHDQ96IW2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.83■□□□□ 0.28
SHDQ96IW2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.83■□□□□ 0.28
SHDQ96IW2 AC007431.3-201ENST00000623221 587 ntBASIC16.83■□□□□ 0.28
SHDQ96IW2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHDQ96IW2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.83■□□□□ 0.28
SHDQ96IW2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SHDQ96IW2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.83■□□□□ 0.28
SHDQ96IW2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.82■□□□□ 0.28
SHDQ96IW2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.82■□□□□ 0.28
SHDQ96IW2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHDQ96IW2 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.82■□□□□ 0.28
SHDQ96IW2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SHDQ96IW2 AC093525.9-201ENST00000624961 1746 ntBASIC16.82■□□□□ 0.28
SHDQ96IW2 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.82■□□□□ 0.28
SHDQ96IW2 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SHDQ96IW2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHDQ96IW2 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SHDQ96IW2 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHDQ96IW2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SHDQ96IW2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHDQ96IW2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SHDQ96IW2 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHDQ96IW2 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHDQ96IW2 TTTY23B-201ENST00000442790 549 ntBASIC16.82■□□□□ 0.28
SHDQ96IW2 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHDQ96IW2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHDQ96IW2 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.82■□□□□ 0.28
SHDQ96IW2 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHDQ96IW2 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SHDQ96IW2 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
SHDQ96IW2 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.82■□□□□ 0.28
SHDQ96IW2 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SHDQ96IW2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.82■□□□□ 0.28
SHDQ96IW2 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.82■□□□□ 0.28
SHDQ96IW2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHDQ96IW2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHDQ96IW2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.82■□□□□ 0.28
SHDQ96IW2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.82■□□□□ 0.28
SHDQ96IW2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHDQ96IW2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SHDQ96IW2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHDQ96IW2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.81■□□□□ 0.28
SHDQ96IW2 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.81■□□□□ 0.28
SHDQ96IW2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHDQ96IW2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHDQ96IW2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
SHDQ96IW2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.81■□□□□ 0.28
SHDQ96IW2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHDQ96IW2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHDQ96IW2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHDQ96IW2 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.81■□□□□ 0.28
SHDQ96IW2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.81■□□□□ 0.28
SHDQ96IW2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHDQ96IW2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.81■□□□□ 0.28
SHDQ96IW2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHDQ96IW2 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHDQ96IW2 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHDQ96IW2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHDQ96IW2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHDQ96IW2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHDQ96IW2 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHDQ96IW2 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHDQ96IW2 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHDQ96IW2 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.81■□□□□ 0.28
SHDQ96IW2 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.81■□□□□ 0.28
SHDQ96IW2 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
SHDQ96IW2 AC022210.1-201ENST00000449856 793 ntBASIC16.81■□□□□ 0.28
SHDQ96IW2 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.81■□□□□ 0.28
SHDQ96IW2 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SHDQ96IW2 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.81■□□□□ 0.28
SHDQ96IW2 BANF1P1-201ENST00000553684 263 ntBASIC16.81■□□□□ 0.28
SHDQ96IW2 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.81■□□□□ 0.28
SHDQ96IW2 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.81■□□□□ 0.28
SHDQ96IW2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHDQ96IW2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHDQ96IW2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHDQ96IW2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.81■□□□□ 0.28
SHDQ96IW2 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHDQ96IW2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SHDQ96IW2 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHDQ96IW2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms