Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.54□□□□□ -0.4
RNF183Q96D59 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RNF183Q96D59 MIR1233-2-201ENST00000408138 82 ntBASIC12.54□□□□□ -0.4
RNF183Q96D59 MIR1233-1-201ENST00000408722 82 ntBASIC12.54□□□□□ -0.4
RNF183Q96D59 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
RNF183Q96D59 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC12.54□□□□□ -0.4
RNF183Q96D59 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.54□□□□□ -0.4
RNF183Q96D59 DNAJB3-201ENST00000446806 729 ntBASIC12.54□□□□□ -0.4
RNF183Q96D59 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC12.54□□□□□ -0.4
RNF183Q96D59 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.54□□□□□ -0.4
RNF183Q96D59 CD63-210ENST00000550776 870 ntTSL 5 BASIC12.54□□□□□ -0.4
RNF183Q96D59 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.54□□□□□ -0.4
RNF183Q96D59 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
RNF183Q96D59 AC002347.1-201ENST00000569543 541 ntBASIC12.54□□□□□ -0.4
RNF183Q96D59 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC12.54□□□□□ -0.4
RNF183Q96D59 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RNF183Q96D59 AC010654.1-201ENST00000615722 808 ntBASIC12.54□□□□□ -0.4
RNF183Q96D59 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
RNF183Q96D59 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RNF183Q96D59 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
RNF183Q96D59 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
RNF183Q96D59 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RNF183Q96D59 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
RNF183Q96D59 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
RNF183Q96D59 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RNF183Q96D59 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RNF183Q96D59 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
RNF183Q96D59 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
RNF183Q96D59 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RNF183Q96D59 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RNF183Q96D59 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RNF183Q96D59 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RNF183Q96D59 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RNF183Q96D59 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
RNF183Q96D59 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
RNF183Q96D59 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC12.54□□□□□ -0.4
RNF183Q96D59 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RNF183Q96D59 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
RNF183Q96D59 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 AC108860.2-201ENST00000562760 2183 ntBASIC12.53□□□□□ -0.4
RNF183Q96D59 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC12.53□□□□□ -0.4
RNF183Q96D59 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC12.53□□□□□ -0.4
RNF183Q96D59 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC12.53□□□□□ -0.4
RNF183Q96D59 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC12.53□□□□□ -0.4
RNF183Q96D59 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
RNF183Q96D59 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
RNF183Q96D59 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
RNF183Q96D59 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
RNF183Q96D59 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.53□□□□□ -0.4
RNF183Q96D59 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
RNF183Q96D59 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.53□□□□□ -0.4
RNF183Q96D59 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.53□□□□□ -0.4
RNF183Q96D59 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.53□□□□□ -0.4
RNF183Q96D59 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
RNF183Q96D59 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC12.53□□□□□ -0.4
RNF183Q96D59 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.53□□□□□ -0.4
RNF183Q96D59 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.53□□□□□ -0.4
RNF183Q96D59 MIR3687-2-201ENST00000577708 61 ntBASIC12.53□□□□□ -0.4
RNF183Q96D59 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.53□□□□□ -0.4
RNF183Q96D59 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.53□□□□□ -0.4
RNF183Q96D59 MIR3687-1-201ENST00000614492 61 ntBASIC12.53□□□□□ -0.4
RNF183Q96D59 AC139530.3-201ENST00000620344 690 ntBASIC12.53□□□□□ -0.4
RNF183Q96D59 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC12.53□□□□□ -0.4
RNF183Q96D59 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 AL590787.1-201ENST00000568856 1315 ntBASIC12.53□□□□□ -0.4
RNF183Q96D59 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.53□□□□□ -0.4
RNF183Q96D59 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
RNF183Q96D59 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 PI4KAP1-204ENST00000612579 1703 ntBASIC12.53□□□□□ -0.4
RNF183Q96D59 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
RNF183Q96D59 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.53□□□□□ -0.4
RNF183Q96D59 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
RNF183Q96D59 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF183Q96D59 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RNF183Q96D59 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC12.52□□□□□ -0.4
RNF183Q96D59 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms