Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.11■□□□□ 0.01
CPNE4Q96A23 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.11■□□□□ 0.01
CPNE4Q96A23 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
CPNE4Q96A23 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.11■□□□□ 0.01
CPNE4Q96A23 KRT19P2-202ENST00000557173 1012 ntBASIC15.11■□□□□ 0.01
CPNE4Q96A23 PDPK2P-202ENST00000562415 1191 ntBASIC15.11■□□□□ 0.01
CPNE4Q96A23 AL031432.2-201ENST00000566714 459 ntBASIC15.11■□□□□ 0.01
CPNE4Q96A23 AL928711.1-201ENST00000570165 459 ntBASIC15.11■□□□□ 0.01
CPNE4Q96A23 MIR4515-201ENST00000584082 81 ntBASIC15.11■□□□□ 0.01
CPNE4Q96A23 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.11■□□□□ 0.01
CPNE4Q96A23 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
CPNE4Q96A23 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE4Q96A23 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE4Q96A23 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE4Q96A23 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE4Q96A23 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE4Q96A23 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE4Q96A23 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE4Q96A23 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CPNE4Q96A23 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE4Q96A23 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CPNE4Q96A23 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE4Q96A23 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE4Q96A23 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE4Q96A23 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE4Q96A23 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.11■□□□□ 0.01
CPNE4Q96A23 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE4Q96A23 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.11■□□□□ 0.01
CPNE4Q96A23 AL596257.1-201ENST00000641463 2694 ntBASIC15.1■□□□□ 0.01
CPNE4Q96A23 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE4Q96A23 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE4Q96A23 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE4Q96A23 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CPNE4Q96A23 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CPNE4Q96A23 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE4Q96A23 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE4Q96A23 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.1■□□□□ 0.01
CPNE4Q96A23 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE4Q96A23 AC131009.4-201ENST00000624048 1740 ntBASIC15.1■□□□□ 0.01
CPNE4Q96A23 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE4Q96A23 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE4Q96A23 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CPNE4Q96A23 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE4Q96A23 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.1■□□□□ 0.01
CPNE4Q96A23 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CPNE4Q96A23 AC004832.2-201ENST00000426397 482 ntBASIC15.1■□□□□ 0.01
CPNE4Q96A23 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.1■□□□□ 0.01
CPNE4Q96A23 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.1■□□□□ 0.01
CPNE4Q96A23 DNAJB3-201ENST00000446806 729 ntBASIC15.1■□□□□ 0.01
CPNE4Q96A23 AC087641.1-201ENST00000557561 1021 ntBASIC15.1■□□□□ 0.01
CPNE4Q96A23 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.1■□□□□ 0.01
CPNE4Q96A23 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.1■□□□□ 0.01
CPNE4Q96A23 MPDU1-223ENST00000582151 728 ntBASIC15.1■□□□□ 0.01
CPNE4Q96A23 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE4Q96A23 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.1■□□□□ 0.01
CPNE4Q96A23 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE4Q96A23 AC012569.1-201ENST00000591191 1524 ntBASIC15.1■□□□□ 0.01
CPNE4Q96A23 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE4Q96A23 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.1■□□□□ 0.01
CPNE4Q96A23 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE4Q96A23 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.1■□□□□ 0.01
CPNE4Q96A23 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CPNE4Q96A23 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CPNE4Q96A23 AC060834.1-201ENST00000443027 2032 ntBASIC15.1■□□□□ 0.01
CPNE4Q96A23 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CPNE4Q96A23 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE4Q96A23 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE4Q96A23 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE4Q96A23 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE4Q96A23 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE4Q96A23 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE4Q96A23 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE4Q96A23 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE4Q96A23 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.1■□□□□ 0.01
CPNE4Q96A23 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE4Q96A23 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CPNE4Q96A23 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.09■□□□□ 0.01
CPNE4Q96A23 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE4Q96A23 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.09■□□□□ 0.01
CPNE4Q96A23 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE4Q96A23 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CPNE4Q96A23 AC025580.3-201ENST00000617932 1424 ntBASIC15.09■□□□□ 0.01
CPNE4Q96A23 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE4Q96A23 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CPNE4Q96A23 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE4Q96A23 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE4Q96A23 AL162727.3-201ENST00000635661 2787 ntBASIC15.09■□□□□ 0.01
CPNE4Q96A23 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.09■□□□□ 0.01
CPNE4Q96A23 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE4Q96A23 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE4Q96A23 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE4Q96A23 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE4Q96A23 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE4Q96A23 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE4Q96A23 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
CPNE4Q96A23 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE4Q96A23 AC023274.1-201ENST00000418278 595 ntBASIC15.09■□□□□ 0.01
CPNE4Q96A23 BX842568.4-201ENST00000421222 227 ntBASIC15.09■□□□□ 0.01
CPNE4Q96A23 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.09■□□□□ 0.01
CPNE4Q96A23 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms