Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 HLA-F-220ENST00000434407 884 ntBASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 RASA4DP-201ENST00000460726 1199 ntBASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 AC023157.3-201ENST00000619086 2088 ntBASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SMIM4Q8WVI0 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 MIR1238-201ENST00000408483 83 ntBASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 STK19B-204ENST00000512515 211 ntBASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 GCSHP2-201ENST00000560971 527 ntBASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.4□□□□□ -0.1
SMIM4Q8WVI0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms