Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BEST2Q8NFU1 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 TFAMP1-201ENST00000412727 736 ntBASIC18.03■□□□□ 0.48
BEST2Q8NFU1 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 AP000344.2-201ENST00000512987 629 ntBASIC18.03■□□□□ 0.48
BEST2Q8NFU1 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 AC105339.1-204ENST00000636249 355 ntBASIC18.03■□□□□ 0.48
BEST2Q8NFU1 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BEST2Q8NFU1 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
BEST2Q8NFU1 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
BEST2Q8NFU1 AKAP8P1-201ENST00000434743 1349 ntBASIC18.02■□□□□ 0.48
BEST2Q8NFU1 KRT18P28-201ENST00000453838 1332 ntBASIC18.02■□□□□ 0.48
BEST2Q8NFU1 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
BEST2Q8NFU1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BEST2Q8NFU1 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BEST2Q8NFU1 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
BEST2Q8NFU1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BEST2Q8NFU1 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BEST2Q8NFU1 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
BEST2Q8NFU1 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
BEST2Q8NFU1 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.02■□□□□ 0.48
BEST2Q8NFU1 SPDYE11-202ENST00000450699 704 ntBASIC18.02■□□□□ 0.48
BEST2Q8NFU1 TIMM8BP1-201ENST00000452384 211 ntBASIC18.02■□□□□ 0.48
BEST2Q8NFU1 RN7SL589P-201ENST00000481268 310 ntBASIC18.02■□□□□ 0.48
BEST2Q8NFU1 LTB4R2-202ENST00000528054 3092 ntBASIC18.02■□□□□ 0.48
BEST2Q8NFU1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.02■□□□□ 0.48
BEST2Q8NFU1 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.02■□□□□ 0.48
BEST2Q8NFU1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.02■□□□□ 0.48
BEST2Q8NFU1 SPDYE9P-201ENST00000570642 692 ntBASIC18.02■□□□□ 0.48
BEST2Q8NFU1 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.02■□□□□ 0.48
BEST2Q8NFU1 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.02■□□□□ 0.48
BEST2Q8NFU1 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.02■□□□□ 0.48
BEST2Q8NFU1 SPDYE10P-202ENST00000612005 668 ntBASIC18.02■□□□□ 0.48
BEST2Q8NFU1 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.02■□□□□ 0.48
BEST2Q8NFU1 SPDYE8P-202ENST00000612377 668 ntBASIC18.02■□□□□ 0.48
BEST2Q8NFU1 AL513210.1-201ENST00000629608 234 ntBASIC18.02■□□□□ 0.48
BEST2Q8NFU1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.02■□□□□ 0.48
BEST2Q8NFU1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.02■□□□□ 0.48
BEST2Q8NFU1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.02■□□□□ 0.47
BEST2Q8NFU1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BEST2Q8NFU1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BEST2Q8NFU1 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.02■□□□□ 0.47
BEST2Q8NFU1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
BEST2Q8NFU1 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
BEST2Q8NFU1 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BEST2Q8NFU1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BEST2Q8NFU1 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST2Q8NFU1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
BEST2Q8NFU1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST2Q8NFU1 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.01■□□□□ 0.47
BEST2Q8NFU1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
BEST2Q8NFU1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST2Q8NFU1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST2Q8NFU1 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BEST2Q8NFU1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST2Q8NFU1 WASH6P-202ENST00000359512 1437 ntBASIC18.01■□□□□ 0.47
BEST2Q8NFU1 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
BEST2Q8NFU1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.01■□□□□ 0.47
BEST2Q8NFU1 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
BEST2Q8NFU1 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST2Q8NFU1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms