Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
SRFBP1Q8NEF9 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SRFBP1Q8NEF9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.07■□□□□ 0.16
SRFBP1Q8NEF9 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SRFBP1Q8NEF9 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRFBP1Q8NEF9 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SRFBP1Q8NEF9 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRFBP1Q8NEF9 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.07■□□□□ 0.16
SRFBP1Q8NEF9 CRYGEP-201ENST00000412192 528 ntBASIC16.07■□□□□ 0.16
SRFBP1Q8NEF9 HCG4-201ENST00000418983 998 ntBASIC16.07■□□□□ 0.16
SRFBP1Q8NEF9 AC079776.4-201ENST00000511039 504 ntBASIC16.07■□□□□ 0.16
SRFBP1Q8NEF9 RNA5SP415-201ENST00000517246 115 ntBASIC16.07■□□□□ 0.16
SRFBP1Q8NEF9 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.07■□□□□ 0.16
SRFBP1Q8NEF9 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SRFBP1Q8NEF9 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRFBP1Q8NEF9 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SRFBP1Q8NEF9 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRFBP1Q8NEF9 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.07■□□□□ 0.16
SRFBP1Q8NEF9 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SRFBP1Q8NEF9 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRFBP1Q8NEF9 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SRFBP1Q8NEF9 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.07■□□□□ 0.16
SRFBP1Q8NEF9 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 AC131009.4-201ENST00000624048 1740 ntBASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 HLA-J-202ENST00000469281 1241 ntBASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 AC107918.2-201ENST00000530817 355 ntBASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 AL645728.1-201ENST00000366221 2101 ntBASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRFBP1Q8NEF9 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 AC026396.1-201ENST00000419388 421 ntBASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 VN2R19P-201ENST00000442399 1052 ntBASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 AC009947.1-201ENST00000444350 727 ntBASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 AC087641.1-201ENST00000557561 1021 ntBASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 AC145285.3-201ENST00000564603 959 ntBASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 AL121894.2-201ENST00000602977 491 ntBASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 Z83851.2-201ENST00000609564 659 ntBASIC16.05■□□□□ 0.16
SRFBP1Q8NEF9 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms