Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 AL161645.1-201ENST00000622716 1255 ntBASIC17.14■□□□□ 0.33
KDM1BQ8NB78 AP001350.2-201ENST00000625104 1094 ntBASIC17.14■□□□□ 0.33
KDM1BQ8NB78 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 KRT18P28-201ENST00000453838 1332 ntBASIC17.14■□□□□ 0.33
KDM1BQ8NB78 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
KDM1BQ8NB78 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 AL355306.1-201ENST00000415580 579 ntBASIC17.13■□□□□ 0.33
KDM1BQ8NB78 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.13■□□□□ 0.33
KDM1BQ8NB78 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 AC099522.2-201ENST00000607001 744 ntBASIC17.13■□□□□ 0.33
KDM1BQ8NB78 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 FLJ38576-201ENST00000623820 2459 ntBASIC17.13■□□□□ 0.33
KDM1BQ8NB78 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 AKAP8P1-201ENST00000434743 1349 ntBASIC17.13■□□□□ 0.33
KDM1BQ8NB78 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 LINC02012-201ENST00000608206 1725 ntBASIC17.13■□□□□ 0.33
KDM1BQ8NB78 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KDM1BQ8NB78 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.12■□□□□ 0.33
KDM1BQ8NB78 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KDM1BQ8NB78 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KDM1BQ8NB78 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.12■□□□□ 0.33
KDM1BQ8NB78 PCDHA14-201ENST00000506751 2298 ntBASIC17.12■□□□□ 0.33
KDM1BQ8NB78 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
KDM1BQ8NB78 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KDM1BQ8NB78 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KDM1BQ8NB78 AL671277.1-201ENST00000429656 993 ntBASIC17.12■□□□□ 0.33
KDM1BQ8NB78 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KDM1BQ8NB78 RN7SL589P-201ENST00000481268 310 ntBASIC17.12■□□□□ 0.33
KDM1BQ8NB78 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
KDM1BQ8NB78 AC087641.1-201ENST00000557561 1021 ntBASIC17.12■□□□□ 0.33
KDM1BQ8NB78 MPDU1-223ENST00000582151 728 ntBASIC17.12■□□□□ 0.33
KDM1BQ8NB78 AC026120.1-201ENST00000611536 926 ntBASIC17.12■□□□□ 0.33
KDM1BQ8NB78 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.12■□□□□ 0.33
KDM1BQ8NB78 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.12■□□□□ 0.33
KDM1BQ8NB78 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
KDM1BQ8NB78 PCDHB19P-201ENST00000570871 2371 ntBASIC17.12■□□□□ 0.33
KDM1BQ8NB78 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KDM1BQ8NB78 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KDM1BQ8NB78 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
KDM1BQ8NB78 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms