Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB42Q8N4Z0 KRT18P3-201ENST00000451602 1288 ntBASIC16.38■□□□□ 0.21
RAB42Q8N4Z0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB42Q8N4Z0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.38■□□□□ 0.21
RAB42Q8N4Z0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RAB42Q8N4Z0 OR7E47P-204ENST00000575924 449 ntBASIC16.38■□□□□ 0.21
RAB42Q8N4Z0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
RAB42Q8N4Z0 AC023141.13-201ENST00000604991 943 ntBASIC16.38■□□□□ 0.21
RAB42Q8N4Z0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB42Q8N4Z0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB42Q8N4Z0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.38■□□□□ 0.21
RAB42Q8N4Z0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB42Q8N4Z0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RAB42Q8N4Z0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB42Q8N4Z0 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB42Q8N4Z0 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB42Q8N4Z0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
RAB42Q8N4Z0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB42Q8N4Z0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RAB42Q8N4Z0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB42Q8N4Z0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 AC131009.4-201ENST00000624048 1740 ntBASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 AC140113.2-201ENST00000604370 208 ntBASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RAB42Q8N4Z0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 AC012569.1-201ENST00000591191 1524 ntBASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 MIR4515-201ENST00000584082 81 ntBASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 AC013467.2-201ENST00000605472 835 ntBASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 LINC00895-201ENST00000629028 1637 ntBASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB42Q8N4Z0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms