Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 AC254562.1-201ENST00000417586 456 ntBASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 DNAJB3-202ENST00000449667 1266 ntBASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 KRT8P48-201ENST00000515599 1220 ntBASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 AC022145.2-201ENST00000598203 171 ntBASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.81■□□□□ 0.12
ARHGEF39Q8N4T4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 AC006538.1-201ENST00000567905 1585 ntBASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 WASH6P-202ENST00000359512 1437 ntBASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 TFAMP1-201ENST00000412727 736 ntBASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 HLA-J-202ENST00000469281 1241 ntBASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 FAM86C2P-203ENST00000528684 1004 ntBASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 AL135744.1-201ENST00000565098 629 ntBASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 AC026120.1-201ENST00000611536 926 ntBASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 FZD10-202ENST00000539839 3282 ntBASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms