Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.04□□□□□ -0.16
ZNF546Q86UE3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.04□□□□□ -0.16
ZNF546Q86UE3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF546Q86UE3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF546Q86UE3 AP005242.2-201ENST00000580065 1175 ntBASIC14.04□□□□□ -0.16
ZNF546Q86UE3 AC092666.2-201ENST00000613287 246 ntBASIC14.04□□□□□ -0.16
ZNF546Q86UE3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF546Q86UE3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF546Q86UE3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF546Q86UE3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.04□□□□□ -0.16
ZNF546Q86UE3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ZNF546Q86UE3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ZNF546Q86UE3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
ZNF546Q86UE3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF546Q86UE3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF546Q86UE3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF546Q86UE3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF546Q86UE3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF546Q86UE3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF546Q86UE3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF546Q86UE3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ZNF546Q86UE3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.03□□□□□ -0.16
ZNF546Q86UE3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 AC002558.1-201ENST00000488906 803 ntBASIC14.03□□□□□ -0.16
ZNF546Q86UE3 AP003041.3-201ENST00000527151 707 ntBASIC14.03□□□□□ -0.16
ZNF546Q86UE3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 AP001412.1-201ENST00000608405 714 ntBASIC14.03□□□□□ -0.16
ZNF546Q86UE3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 AC023157.3-201ENST00000619086 2088 ntBASIC14.03□□□□□ -0.16
ZNF546Q86UE3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 SNX18-202ENST00000343017 3140 ntBASIC14.03□□□□□ -0.16
ZNF546Q86UE3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF546Q86UE3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF546Q86UE3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
ZNF546Q86UE3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF546Q86UE3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
ZNF546Q86UE3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF546Q86UE3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF546Q86UE3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
ZNF546Q86UE3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
ZNF546Q86UE3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
ZNF546Q86UE3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF546Q86UE3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.02□□□□□ -0.16
ZNF546Q86UE3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.02□□□□□ -0.16
ZNF546Q86UE3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
ZNF546Q86UE3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
ZNF546Q86UE3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF546Q86UE3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF546Q86UE3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.02□□□□□ -0.17
ZNF546Q86UE3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.02□□□□□ -0.17
ZNF546Q86UE3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.02□□□□□ -0.17
ZNF546Q86UE3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.02□□□□□ -0.17
ZNF546Q86UE3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF546Q86UE3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.02□□□□□ -0.17
ZNF546Q86UE3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
ZNF546Q86UE3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.02□□□□□ -0.17
ZNF546Q86UE3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
ZNF546Q86UE3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF546Q86UE3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF546Q86UE3 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF546Q86UE3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms