Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 MPDU1-223ENST00000582151 728 ntBASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 AL645728.1-201ENST00000366221 2101 ntBASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 PMS2P7-201ENST00000506558 1336 ntBASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 KRT18P3-201ENST00000451602 1288 ntBASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 RNA5SP416-201ENST00000516838 111 ntBASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 AC096734.2-201ENST00000562054 433 ntBASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 AC091167.2-201ENST00000579581 588 ntBASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 AC005412.3-201ENST00000580309 715 ntBASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
LYSMD3Q7Z3D4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LYSMD3Q7Z3D4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LYSMD3Q7Z3D4 AC078925.2-201ENST00000624013 1973 ntBASIC16.89■□□□□ 0.3
LYSMD3Q7Z3D4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.3
LYSMD3Q7Z3D4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 AL353732.1-201ENST00000569618 1459 ntBASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 AL513480.1-201ENST00000451731 511 ntBASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD3Q7Z3D4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms