Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 AC006116.8-202ENST00000587620 1550 ntBASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 AL845331.1-201ENST00000424978 1190 ntBASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 KRT17P6-201ENST00000453795 1220 ntBASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 AC074051.2-201ENST00000565115 352 ntBASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 AC125634.1-201ENST00000438758 1403 ntBASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TMEM53Q6P2H8 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 AC012615.1-201ENST00000565797 1299 ntBASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 MIR3180-1-201ENST00000580374 94 ntBASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 MIR3180-3-201ENST00000584616 94 ntBASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.5■□□□□ 0.07
TMEM53Q6P2H8 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM53Q6P2H8 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.49■□□□□ 0.07
TMEM53Q6P2H8 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM53Q6P2H8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.49■□□□□ 0.07
TMEM53Q6P2H8 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM53Q6P2H8 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.49■□□□□ 0.07
TMEM53Q6P2H8 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM53Q6P2H8 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.49■□□□□ 0.07
TMEM53Q6P2H8 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.49■□□□□ 0.07
TMEM53Q6P2H8 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.49■□□□□ 0.07
TMEM53Q6P2H8 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM53Q6P2H8 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM53Q6P2H8 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.49■□□□□ 0.07
TMEM53Q6P2H8 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
TMEM53Q6P2H8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM53Q6P2H8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.49■□□□□ 0.07
TMEM53Q6P2H8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM53Q6P2H8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.49■□□□□ 0.07
TMEM53Q6P2H8 HCG4P8-203ENST00000443049 980 ntBASIC15.49■□□□□ 0.07
TMEM53Q6P2H8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
TMEM53Q6P2H8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM53Q6P2H8 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.49■□□□□ 0.07
TMEM53Q6P2H8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.49■□□□□ 0.07
TMEM53Q6P2H8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.49■□□□□ 0.07
TMEM53Q6P2H8 AC005336.2-201ENST00000593183 939 ntBASIC15.49■□□□□ 0.07
TMEM53Q6P2H8 AL138831.2-201ENST00000606564 490 ntBASIC15.49■□□□□ 0.07
TMEM53Q6P2H8 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM53Q6P2H8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms