Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL54Q6P161 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL54Q6P161 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL54Q6P161 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL54Q6P161 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL54Q6P161 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 AC006058.4-201ENST00000624016 1670 ntBASIC12.76□□□□□ -0.37
MRPL54Q6P161 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL54Q6P161 AC022532.1-201ENST00000624563 1728 ntBASIC12.76□□□□□ -0.37
MRPL54Q6P161 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL54Q6P161 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL54Q6P161 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL54Q6P161 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL54Q6P161 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL54Q6P161 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL54Q6P161 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL54Q6P161 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL54Q6P161 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL54Q6P161 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.76□□□□□ -0.37
MRPL54Q6P161 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL54Q6P161 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL54Q6P161 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL54Q6P161 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
MRPL54Q6P161 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL54Q6P161 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL54Q6P161 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.75□□□□□ -0.37
MRPL54Q6P161 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.75□□□□□ -0.37
MRPL54Q6P161 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
MRPL54Q6P161 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL54Q6P161 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL54Q6P161 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL54Q6P161 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
MRPL54Q6P161 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC12.75□□□□□ -0.37
MRPL54Q6P161 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
MRPL54Q6P161 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.75□□□□□ -0.37
MRPL54Q6P161 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC12.75□□□□□ -0.37
MRPL54Q6P161 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.75□□□□□ -0.37
MRPL54Q6P161 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL54Q6P161 AC002558.1-201ENST00000488906 803 ntBASIC12.75□□□□□ -0.37
MRPL54Q6P161 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL54Q6P161 FDX2-206ENST00000492239 773 ntTSL 2 BASIC12.75□□□□□ -0.37
MRPL54Q6P161 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL54Q6P161 PC-208ENST00000529047 1607 ntTSL 3 BASIC12.75□□□□□ -0.37
MRPL54Q6P161 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL54Q6P161 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL54Q6P161 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC12.75□□□□□ -0.37
MRPL54Q6P161 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL54Q6P161 TMED1-207ENST00000591695 809 ntTSL 5 BASIC12.75□□□□□ -0.37
MRPL54Q6P161 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL54Q6P161 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
MRPL54Q6P161 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL54Q6P161 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL54Q6P161 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL54Q6P161 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL54Q6P161 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL54Q6P161 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL54Q6P161 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL54Q6P161 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.74□□□□□ -0.37
MRPL54Q6P161 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.74□□□□□ -0.37
MRPL54Q6P161 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
MRPL54Q6P161 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.74□□□□□ -0.37
MRPL54Q6P161 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC12.74□□□□□ -0.37
MRPL54Q6P161 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
MRPL54Q6P161 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
MRPL54Q6P161 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.74□□□□□ -0.37
MRPL54Q6P161 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
MRPL54Q6P161 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
MRPL54Q6P161 ILF2-202ENST00000368681 726 ntTSL 2 BASIC12.74□□□□□ -0.37
MRPL54Q6P161 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL54Q6P161 AC133681.1-201ENST00000465482 601 ntBASIC12.74□□□□□ -0.37
MRPL54Q6P161 AL162430.1-201ENST00000480705 870 ntBASIC12.74□□□□□ -0.37
MRPL54Q6P161 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC12.74□□□□□ -0.37
MRPL54Q6P161 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC12.74□□□□□ -0.37
MRPL54Q6P161 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
MRPL54Q6P161 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC12.74□□□□□ -0.37
MRPL54Q6P161 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC12.74□□□□□ -0.37
MRPL54Q6P161 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms