Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 CXCL1P1-201ENST00000502804 216 ntBASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TTC39BQ5VTQ0 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TTC39BQ5VTQ0 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.52■□□□□ 0.4
TTC39BQ5VTQ0 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.52■□□□□ 0.4
TTC39BQ5VTQ0 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TTC39BQ5VTQ0 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
TTC39BQ5VTQ0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.52■□□□□ 0.4
TTC39BQ5VTQ0 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TTC39BQ5VTQ0 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TTC39BQ5VTQ0 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TTC39BQ5VTQ0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TTC39BQ5VTQ0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TTC39BQ5VTQ0 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TTC39BQ5VTQ0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TTC39BQ5VTQ0 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TTC39BQ5VTQ0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.52■□□□□ 0.4
TTC39BQ5VTQ0 AC002347.1-201ENST00000569543 541 ntBASIC17.52■□□□□ 0.4
TTC39BQ5VTQ0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
TTC39BQ5VTQ0 AC010507.1-201ENST00000633895 436 ntBASIC17.52■□□□□ 0.4
TTC39BQ5VTQ0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.52■□□□□ 0.4
TTC39BQ5VTQ0 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.52■□□□□ 0.4
TTC39BQ5VTQ0 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
TTC39BQ5VTQ0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.52■□□□□ 0.39
TTC39BQ5VTQ0 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TTC39BQ5VTQ0 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TTC39BQ5VTQ0 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TTC39BQ5VTQ0 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TTC39BQ5VTQ0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TTC39BQ5VTQ0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
TTC39BQ5VTQ0 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TTC39BQ5VTQ0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.52■□□□□ 0.39
TTC39BQ5VTQ0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TTC39BQ5VTQ0 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 AC092053.1-201ENST00000605787 1936 ntBASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 RHOQP3-201ENST00000437982 621 ntBASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 FAM185BP-201ENST00000443595 716 ntBASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TTC39BQ5VTQ0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms