Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.44■□□□□ 0.38
LRRC38Q5VT99 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC38Q5VT99 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.44■□□□□ 0.38
LRRC38Q5VT99 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LRRC38Q5VT99 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC38Q5VT99 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LRRC38Q5VT99 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LRRC38Q5VT99 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC38Q5VT99 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC38Q5VT99 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC38Q5VT99 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.44■□□□□ 0.38
LRRC38Q5VT99 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LRRC38Q5VT99 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.44■□□□□ 0.38
LRRC38Q5VT99 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.44■□□□□ 0.38
LRRC38Q5VT99 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.44■□□□□ 0.38
LRRC38Q5VT99 AC105339.3-201ENST00000560043 636 ntBASIC17.44■□□□□ 0.38
LRRC38Q5VT99 MIR1199-201ENST00000621445 119 ntBASIC17.44■□□□□ 0.38
LRRC38Q5VT99 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC38Q5VT99 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.44■□□□□ 0.38
LRRC38Q5VT99 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC38Q5VT99 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.44■□□□□ 0.38
LRRC38Q5VT99 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC38Q5VT99 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC38Q5VT99 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC38Q5VT99 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC38Q5VT99 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
LRRC38Q5VT99 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC38Q5VT99 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.43■□□□□ 0.38
LRRC38Q5VT99 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 AL356488.2-201ENST00000602755 427 ntBASIC17.43■□□□□ 0.38
LRRC38Q5VT99 AL121912.1-201ENST00000603683 238 ntBASIC17.43■□□□□ 0.38
LRRC38Q5VT99 TP73-AS1-207ENST00000624167 988 ntBASIC17.43■□□□□ 0.38
LRRC38Q5VT99 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 GPAA1P2-202ENST00000606848 1787 ntBASIC17.43■□□□□ 0.38
LRRC38Q5VT99 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.43■□□□□ 0.38
LRRC38Q5VT99 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 AC005052.1-201ENST00000625181 2492 ntBASIC17.42■□□□□ 0.38
LRRC38Q5VT99 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 HNRNPDP1-201ENST00000439535 754 ntBASIC17.42■□□□□ 0.38
LRRC38Q5VT99 FAM197Y8-203ENST00000450145 560 ntBASIC17.42■□□□□ 0.38
LRRC38Q5VT99 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms