Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.02□□□□□ -0.16
ANKRD55Q3KP44 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ANKRD55Q3KP44 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
ANKRD55Q3KP44 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ANKRD55Q3KP44 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.02□□□□□ -0.16
ANKRD55Q3KP44 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ANKRD55Q3KP44 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ANKRD55Q3KP44 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ANKRD55Q3KP44 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.02□□□□□ -0.16
ANKRD55Q3KP44 KRT8P10-201ENST00000450021 1447 ntBASIC14.02□□□□□ -0.16
ANKRD55Q3KP44 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.02□□□□□ -0.17
ANKRD55Q3KP44 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ANKRD55Q3KP44 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ANKRD55Q3KP44 HOMER2P1-201ENST00000455653 964 ntBASIC14.02□□□□□ -0.17
ANKRD55Q3KP44 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ANKRD55Q3KP44 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.02□□□□□ -0.17
ANKRD55Q3KP44 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.02□□□□□ -0.17
ANKRD55Q3KP44 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ANKRD55Q3KP44 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ANKRD55Q3KP44 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
ANKRD55Q3KP44 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.02□□□□□ -0.17
ANKRD55Q3KP44 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.02□□□□□ -0.17
ANKRD55Q3KP44 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
ANKRD55Q3KP44 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ANKRD55Q3KP44 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ANKRD55Q3KP44 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ANKRD55Q3KP44 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ANKRD55Q3KP44 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ANKRD55Q3KP44 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14□□□□□ -0.17
ANKRD55Q3KP44 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14□□□□□ -0.17
ANKRD55Q3KP44 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14□□□□□ -0.17
ANKRD55Q3KP44 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ANKRD55Q3KP44 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ANKRD55Q3KP44 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ANKRD55Q3KP44 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14□□□□□ -0.17
ANKRD55Q3KP44 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
ANKRD55Q3KP44 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14□□□□□ -0.17
ANKRD55Q3KP44 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
ANKRD55Q3KP44 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14□□□□□ -0.17
ANKRD55Q3KP44 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ANKRD55Q3KP44 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ANKRD55Q3KP44 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14□□□□□ -0.17
ANKRD55Q3KP44 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ANKRD55Q3KP44 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14□□□□□ -0.17
ANKRD55Q3KP44 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ANKRD55Q3KP44 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14□□□□□ -0.17
ANKRD55Q3KP44 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ANKRD55Q3KP44 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ANKRD55Q3KP44 MIR1224-201ENST00000408193 85 ntBASIC14□□□□□ -0.17
ANKRD55Q3KP44 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ANKRD55Q3KP44 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14□□□□□ -0.17
ANKRD55Q3KP44 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14□□□□□ -0.17
ANKRD55Q3KP44 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14□□□□□ -0.17
ANKRD55Q3KP44 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14□□□□□ -0.17
ANKRD55Q3KP44 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14□□□□□ -0.17
ANKRD55Q3KP44 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms