Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
SPHKAPQ2M3C7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SPHKAPQ2M3C7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPHKAPQ2M3C7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPHKAPQ2M3C7 AL589702.1-201ENST00000641229 1509 ntBASIC23.79■■□□□ 1.4
SPHKAPQ2M3C7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPHKAPQ2M3C7 AC135586.1-201ENST00000539323 574 ntBASIC23.79■■□□□ 1.4
SPHKAPQ2M3C7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC23.79■■□□□ 1.4
SPHKAPQ2M3C7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC23.78■■□□□ 1.4
SPHKAPQ2M3C7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SPHKAPQ2M3C7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SPHKAPQ2M3C7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC23.78■■□□□ 1.4
SPHKAPQ2M3C7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
SPHKAPQ2M3C7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SPHKAPQ2M3C7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SPHKAPQ2M3C7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SPHKAPQ2M3C7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SPHKAPQ2M3C7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SPHKAPQ2M3C7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC23.78■■□□□ 1.4
SPHKAPQ2M3C7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
SPHKAPQ2M3C7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SPHKAPQ2M3C7 AL391256.1-201ENST00000443260 1855 ntBASIC23.78■■□□□ 1.4
SPHKAPQ2M3C7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SPHKAPQ2M3C7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC23.78■■□□□ 1.4
SPHKAPQ2M3C7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SPHKAPQ2M3C7 AL023806.1-201ENST00000603994 1649 ntBASIC23.78■■□□□ 1.4
SPHKAPQ2M3C7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC23.78■■□□□ 1.4
SPHKAPQ2M3C7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SPHKAPQ2M3C7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
SPHKAPQ2M3C7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SPHKAPQ2M3C7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPHKAPQ2M3C7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPHKAPQ2M3C7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC23.77■■□□□ 1.4
SPHKAPQ2M3C7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
SPHKAPQ2M3C7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC23.77■■□□□ 1.4
SPHKAPQ2M3C7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPHKAPQ2M3C7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SPHKAPQ2M3C7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPHKAPQ2M3C7 AL645608.8-201ENST00000606034 2086 ntBASIC23.77■■□□□ 1.4
SPHKAPQ2M3C7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC23.77■■□□□ 1.4
SPHKAPQ2M3C7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC23.77■■□□□ 1.4
SPHKAPQ2M3C7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
SPHKAPQ2M3C7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC23.77■■□□□ 1.4
SPHKAPQ2M3C7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC23.77■■□□□ 1.4
SPHKAPQ2M3C7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPHKAPQ2M3C7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPHKAPQ2M3C7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
SPHKAPQ2M3C7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SPHKAPQ2M3C7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
SPHKAPQ2M3C7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SPHKAPQ2M3C7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC23.76■■□□□ 1.39
SPHKAPQ2M3C7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SPHKAPQ2M3C7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SPHKAPQ2M3C7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC23.76■■□□□ 1.39
SPHKAPQ2M3C7 5S_rRNA.22-201ENST00000614916 106 ntBASIC23.76■■□□□ 1.39
SPHKAPQ2M3C7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SPHKAPQ2M3C7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC23.76■■□□□ 1.39
SPHKAPQ2M3C7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SPHKAPQ2M3C7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SPHKAPQ2M3C7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC23.76■■□□□ 1.39
SPHKAPQ2M3C7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC23.76■■□□□ 1.39
SPHKAPQ2M3C7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC23.76■■□□□ 1.39
SPHKAPQ2M3C7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
SPHKAPQ2M3C7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
SPHKAPQ2M3C7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SPHKAPQ2M3C7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SPHKAPQ2M3C7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
SPHKAPQ2M3C7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
SPHKAPQ2M3C7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC23.76■■□□□ 1.39
SPHKAPQ2M3C7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC23.76■■□□□ 1.39
SPHKAPQ2M3C7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SPHKAPQ2M3C7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC23.75■■□□□ 1.39
SPHKAPQ2M3C7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC23.75■■□□□ 1.39
SPHKAPQ2M3C7 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SPHKAPQ2M3C7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC23.75■■□□□ 1.39
SPHKAPQ2M3C7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
SPHKAPQ2M3C7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SPHKAPQ2M3C7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SPHKAPQ2M3C7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC23.75■■□□□ 1.39
SPHKAPQ2M3C7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SPHKAPQ2M3C7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SPHKAPQ2M3C7 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SPHKAPQ2M3C7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SPHKAPQ2M3C7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC23.75■■□□□ 1.39
SPHKAPQ2M3C7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SPHKAPQ2M3C7 U91328.1-201ENST00000437528 223 ntBASIC23.75■■□□□ 1.39
SPHKAPQ2M3C7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC23.75■■□□□ 1.39
SPHKAPQ2M3C7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC23.75■■□□□ 1.39
SPHKAPQ2M3C7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC23.75■■□□□ 1.39
SPHKAPQ2M3C7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SPHKAPQ2M3C7 AL133373.2-201ENST00000623187 2828 ntBASIC23.75■■□□□ 1.39
SPHKAPQ2M3C7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC23.75■■□□□ 1.39
SPHKAPQ2M3C7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC23.74■■□□□ 1.39
SPHKAPQ2M3C7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC23.74■■□□□ 1.39
SPHKAPQ2M3C7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC23.74■■□□□ 1.39
SPHKAPQ2M3C7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC23.74■■□□□ 1.39
SPHKAPQ2M3C7 GGT3P-204ENST00000453783 1664 ntBASIC23.74■■□□□ 1.39
SPHKAPQ2M3C7 AL391825.1-201ENST00000457671 1364 ntBASIC23.74■■□□□ 1.39
SPHKAPQ2M3C7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SPHKAPQ2M3C7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms