Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX4P78413 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.56■□□□□ 0.4
IRX4P78413 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.56■□□□□ 0.4
IRX4P78413 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.56■□□□□ 0.4
IRX4P78413 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX4P78413 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX4P78413 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.55■□□□□ 0.4
IRX4P78413 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX4P78413 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX4P78413 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX4P78413 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.55■□□□□ 0.4
IRX4P78413 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX4P78413 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX4P78413 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
IRX4P78413 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX4P78413 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX4P78413 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX4P78413 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
IRX4P78413 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX4P78413 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.55■□□□□ 0.4
IRX4P78413 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX4P78413 AC254562.1-201ENST00000417586 456 ntBASIC17.55■□□□□ 0.4
IRX4P78413 AC007967.3-201ENST00000434308 558 ntBASIC17.55■□□□□ 0.4
IRX4P78413 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.55■□□□□ 0.4
IRX4P78413 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.55■□□□□ 0.4
IRX4P78413 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
IRX4P78413 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.55■□□□□ 0.4
IRX4P78413 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.55■□□□□ 0.4
IRX4P78413 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
IRX4P78413 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX4P78413 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
IRX4P78413 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX4P78413 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
IRX4P78413 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX4P78413 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
IRX4P78413 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX4P78413 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
IRX4P78413 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.54■□□□□ 0.4
IRX4P78413 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX4P78413 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.54■□□□□ 0.4
IRX4P78413 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
IRX4P78413 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX4P78413 PMPCAP1-201ENST00000508114 1576 ntBASIC17.54■□□□□ 0.4
IRX4P78413 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.54■□□□□ 0.4
IRX4P78413 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX4P78413 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX4P78413 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX4P78413 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.54■□□□□ 0.4
IRX4P78413 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX4P78413 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX4P78413 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX4P78413 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.54■□□□□ 0.4
IRX4P78413 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX4P78413 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX4P78413 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
IRX4P78413 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX4P78413 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX4P78413 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
IRX4P78413 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.54■□□□□ 0.4
IRX4P78413 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
IRX4P78413 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
IRX4P78413 HTR5BP-201ENST00000430851 1154 ntBASIC17.54■□□□□ 0.4
IRX4P78413 ALG1L5P-201ENST00000482043 771 ntBASIC17.54■□□□□ 0.4
IRX4P78413 AC136632.2-201ENST00000512891 861 ntBASIC17.54■□□□□ 0.4
IRX4P78413 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.54■□□□□ 0.4
IRX4P78413 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.54■□□□□ 0.4
IRX4P78413 AC092865.6-201ENST00000642101 219 ntBASIC17.54■□□□□ 0.4
IRX4P78413 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
IRX4P78413 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX4P78413 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.54■□□□□ 0.4
IRX4P78413 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
IRX4P78413 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
IRX4P78413 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.54■□□□□ 0.4
IRX4P78413 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
IRX4P78413 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.54■□□□□ 0.4
IRX4P78413 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
IRX4P78413 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
IRX4P78413 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.53■□□□□ 0.4
IRX4P78413 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.53■□□□□ 0.4
IRX4P78413 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.53■□□□□ 0.4
IRX4P78413 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IRX4P78413 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IRX4P78413 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IRX4P78413 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IRX4P78413 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.53■□□□□ 0.4
IRX4P78413 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IRX4P78413 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IRX4P78413 PCDHA14-201ENST00000506751 2298 ntBASIC17.53■□□□□ 0.4
IRX4P78413 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IRX4P78413 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.53■□□□□ 0.4
IRX4P78413 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.53■□□□□ 0.4
IRX4P78413 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.53■□□□□ 0.4
IRX4P78413 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IRX4P78413 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.53■□□□□ 0.4
IRX4P78413 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.53■□□□□ 0.4
IRX4P78413 AL645939.2-201ENST00000427340 991 ntBASIC17.53■□□□□ 0.4
IRX4P78413 DDX43P3-201ENST00000441064 443 ntBASIC17.53■□□□□ 0.4
IRX4P78413 PRYP5-201ENST00000451909 266 ntBASIC17.53■□□□□ 0.4
IRX4P78413 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IRX4P78413 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms