Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SEC61A1P61619 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.81□□□□□ -0.04
SEC61A1P61619 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEC61A1P61619 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SEC61A1P61619 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEC61A1P61619 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEC61A1P61619 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEC61A1P61619 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEC61A1P61619 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.8□□□□□ -0.04
SEC61A1P61619 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.8□□□□□ -0.04
SEC61A1P61619 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEC61A1P61619 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SEC61A1P61619 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.8□□□□□ -0.04
SEC61A1P61619 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEC61A1P61619 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.8□□□□□ -0.04
SEC61A1P61619 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEC61A1P61619 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEC61A1P61619 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SEC61A1P61619 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.8□□□□□ -0.04
SEC61A1P61619 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.8□□□□□ -0.04
SEC61A1P61619 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.8□□□□□ -0.04
SEC61A1P61619 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.8□□□□□ -0.04
SEC61A1P61619 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SEC61A1P61619 AP002469.2-201ENST00000531724 424 ntBASIC14.8□□□□□ -0.04
SEC61A1P61619 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SEC61A1P61619 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
SEC61A1P61619 AL160237.2-201ENST00000556165 472 ntBASIC14.8□□□□□ -0.04
SEC61A1P61619 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SEC61A1P61619 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEC61A1P61619 AC011467.2-201ENST00000598425 242 ntBASIC14.8□□□□□ -0.04
SEC61A1P61619 TP73-AS1-207ENST00000624167 988 ntBASIC14.8□□□□□ -0.04
SEC61A1P61619 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.8□□□□□ -0.04
SEC61A1P61619 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SEC61A1P61619 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.8□□□□□ -0.04
SEC61A1P61619 AC016396.2-201ENST00000562575 1417 ntBASIC14.8□□□□□ -0.04
SEC61A1P61619 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEC61A1P61619 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.8□□□□□ -0.04
SEC61A1P61619 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEC61A1P61619 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SEC61A1P61619 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.8□□□□□ -0.04
SEC61A1P61619 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.8□□□□□ -0.04
SEC61A1P61619 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SEC61A1P61619 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEC61A1P61619 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEC61A1P61619 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SEC61A1P61619 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SEC61A1P61619 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEC61A1P61619 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEC61A1P61619 LYSMD4-203ENST00000378904 2122 ntBASIC14.8□□□□□ -0.04
SEC61A1P61619 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SEC61A1P61619 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEC61A1P61619 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SEC61A1P61619 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEC61A1P61619 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEC61A1P61619 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEC61A1P61619 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SEC61A1P61619 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEC61A1P61619 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEC61A1P61619 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEC61A1P61619 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEC61A1P61619 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEC61A1P61619 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.79□□□□□ -0.04
SEC61A1P61619 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEC61A1P61619 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
SEC61A1P61619 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEC61A1P61619 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SEC61A1P61619 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SEC61A1P61619 MRPL3P1-201ENST00000400109 1033 ntBASIC14.79□□□□□ -0.04
SEC61A1P61619 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEC61A1P61619 AC007967.3-201ENST00000434308 558 ntBASIC14.79□□□□□ -0.04
SEC61A1P61619 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.79□□□□□ -0.04
SEC61A1P61619 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.79□□□□□ -0.04
SEC61A1P61619 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SEC61A1P61619 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SEC61A1P61619 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.79□□□□□ -0.04
SEC61A1P61619 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.79□□□□□ -0.04
SEC61A1P61619 AP001269.4-201ENST00000609611 512 ntBASIC14.79□□□□□ -0.04
SEC61A1P61619 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.79□□□□□ -0.04
SEC61A1P61619 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.79□□□□□ -0.04
SEC61A1P61619 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SEC61A1P61619 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEC61A1P61619 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SEC61A1P61619 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.79□□□□□ -0.04
SEC61A1P61619 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEC61A1P61619 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEC61A1P61619 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEC61A1P61619 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEC61A1P61619 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.79□□□□□ -0.04
SEC61A1P61619 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SEC61A1P61619 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEC61A1P61619 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.78□□□□□ -0.04
SEC61A1P61619 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.78□□□□□ -0.04
SEC61A1P61619 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.78□□□□□ -0.04
SEC61A1P61619 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SEC61A1P61619 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEC61A1P61619 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SEC61A1P61619 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEC61A1P61619 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEC61A1P61619 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
SEC61A1P61619 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms