Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
FAM3BP58499 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FAM3BP58499 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FAM3BP58499 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
FAM3BP58499 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
FAM3BP58499 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FAM3BP58499 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.18□□□□□ -0.3
FAM3BP58499 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
FAM3BP58499 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.18□□□□□ -0.3
FAM3BP58499 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FAM3BP58499 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.18□□□□□ -0.3
FAM3BP58499 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FAM3BP58499 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
FAM3BP58499 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FAM3BP58499 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FAM3BP58499 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FAM3BP58499 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM3BP58499 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM3BP58499 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
FAM3BP58499 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.17□□□□□ -0.3
FAM3BP58499 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.17□□□□□ -0.3
FAM3BP58499 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.17□□□□□ -0.3
FAM3BP58499 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FAM3BP58499 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.17□□□□□ -0.3
FAM3BP58499 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.17□□□□□ -0.3
FAM3BP58499 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC13.17□□□□□ -0.3
FAM3BP58499 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FAM3BP58499 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.17□□□□□ -0.3
FAM3BP58499 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC13.17□□□□□ -0.3
FAM3BP58499 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM3BP58499 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM3BP58499 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM3BP58499 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM3BP58499 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM3BP58499 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.17□□□□□ -0.3
FAM3BP58499 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM3BP58499 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
FAM3BP58499 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM3BP58499 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.17□□□□□ -0.3
FAM3BP58499 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
FAM3BP58499 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FAM3BP58499 LINC01311-201ENST00000565162 1445 ntBASIC13.17□□□□□ -0.3
FAM3BP58499 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
FAM3BP58499 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM3BP58499 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.17□□□□□ -0.3
FAM3BP58499 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM3BP58499 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
FAM3BP58499 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
FAM3BP58499 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.17□□□□□ -0.3
FAM3BP58499 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.17□□□□□ -0.3
FAM3BP58499 AL023803.3-201ENST00000615559 522 ntBASIC13.17□□□□□ -0.3
FAM3BP58499 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM3BP58499 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM3BP58499 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM3BP58499 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.17□□□□□ -0.3
FAM3BP58499 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FAM3BP58499 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM3BP58499 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.17□□□□□ -0.3
FAM3BP58499 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM3BP58499 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
FAM3BP58499 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FAM3BP58499 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM3BP58499 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM3BP58499 AC093525.9-201ENST00000624961 1746 ntBASIC13.16□□□□□ -0.3
FAM3BP58499 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM3BP58499 AC138035.3-201ENST00000622706 2791 ntBASIC13.16□□□□□ -0.3
FAM3BP58499 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM3BP58499 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FAM3BP58499 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
FAM3BP58499 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM3BP58499 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM3BP58499 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
FAM3BP58499 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
FAM3BP58499 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM3BP58499 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM3BP58499 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM3BP58499 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM3BP58499 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.16□□□□□ -0.3
FAM3BP58499 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
FAM3BP58499 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM3BP58499 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM3BP58499 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
FAM3BP58499 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM3BP58499 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM3BP58499 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM3BP58499 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM3BP58499 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FAM3BP58499 PRR31-201ENST00000371629 978 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM3BP58499 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM3BP58499 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
FAM3BP58499 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.16□□□□□ -0.3
FAM3BP58499 AC007663.1-201ENST00000438948 1240 ntBASIC13.16□□□□□ -0.3
FAM3BP58499 AC008040.2-201ENST00000461049 708 ntBASIC13.16□□□□□ -0.3
FAM3BP58499 FDX2-206ENST00000492239 773 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM3BP58499 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.16□□□□□ -0.3
FAM3BP58499 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC13.16□□□□□ -0.3
FAM3BP58499 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
FAM3BP58499 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM3BP58499 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM3BP58499 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms