Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RIPK4P57078 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RIPK4P57078 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RIPK4P57078 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RIPK4P57078 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RIPK4P57078 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RIPK4P57078 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC21.94■■□□□ 1.1
RIPK4P57078 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RIPK4P57078 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC21.94■■□□□ 1.1
RIPK4P57078 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RIPK4P57078 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC21.94■■□□□ 1.1
RIPK4P57078 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RIPK4P57078 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RIPK4P57078 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
RIPK4P57078 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC21.94■■□□□ 1.1
RIPK4P57078 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RIPK4P57078 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
RIPK4P57078 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RIPK4P57078 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RIPK4P57078 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RIPK4P57078 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RIPK4P57078 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC21.94■■□□□ 1.1
RIPK4P57078 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RIPK4P57078 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC21.94■■□□□ 1.1
RIPK4P57078 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
RIPK4P57078 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RIPK4P57078 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
RIPK4P57078 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC21.94■■□□□ 1.1
RIPK4P57078 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RIPK4P57078 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC21.94■■□□□ 1.1
RIPK4P57078 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC21.94■■□□□ 1.1
RIPK4P57078 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RIPK4P57078 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RIPK4P57078 AMT-206ENST00000458307 1860 ntTSL 2 BASIC21.94■■□□□ 1.1
RIPK4P57078 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RIPK4P57078 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC21.94■■□□□ 1.1
RIPK4P57078 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RIPK4P57078 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
RIPK4P57078 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
RIPK4P57078 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
RIPK4P57078 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RIPK4P57078 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC21.93■■□□□ 1.1
RIPK4P57078 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RIPK4P57078 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RIPK4P57078 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RIPK4P57078 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
RIPK4P57078 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
RIPK4P57078 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
RIPK4P57078 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC21.93■■□□□ 1.1
RIPK4P57078 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
RIPK4P57078 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC21.93■■□□□ 1.1
RIPK4P57078 WDR53-204ENST00000433160 887 ntTSL 5 BASIC21.93■■□□□ 1.1
RIPK4P57078 AP006288.1-201ENST00000446065 395 ntBASIC21.93■■□□□ 1.1
RIPK4P57078 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RIPK4P57078 DNAJB3-202ENST00000449667 1266 ntBASIC21.93■■□□□ 1.1
RIPK4P57078 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RIPK4P57078 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC21.93■■□□□ 1.1
RIPK4P57078 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC21.93■■□□□ 1.1
RIPK4P57078 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
RIPK4P57078 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
RIPK4P57078 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
RIPK4P57078 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
RIPK4P57078 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC21.93■■□□□ 1.1
RIPK4P57078 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC21.93■■□□□ 1.1
RIPK4P57078 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC21.93■■□□□ 1.1
RIPK4P57078 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC21.93■■□□□ 1.1
RIPK4P57078 AL161645.1-201ENST00000622716 1255 ntBASIC21.93■■□□□ 1.1
RIPK4P57078 AL512652.2-201ENST00000625156 1716 ntBASIC21.93■■□□□ 1.1
RIPK4P57078 AL139011.1-202ENST00000642063 584 ntBASIC21.93■■□□□ 1.1
RIPK4P57078 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
RIPK4P57078 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RIPK4P57078 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
RIPK4P57078 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RIPK4P57078 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RIPK4P57078 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RIPK4P57078 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RIPK4P57078 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RIPK4P57078 OR6D1P-202ENST00000641007 5290 ntBASIC21.92■■□□□ 1.1
RIPK4P57078 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC21.92■■□□□ 1.1
RIPK4P57078 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC21.92■■□□□ 1.1
RIPK4P57078 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC21.92■■□□□ 1.1
RIPK4P57078 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RIPK4P57078 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RIPK4P57078 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RIPK4P57078 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
RIPK4P57078 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RIPK4P57078 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RIPK4P57078 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RIPK4P57078 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RIPK4P57078 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RIPK4P57078 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RIPK4P57078 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC21.92■■□□□ 1.1
RIPK4P57078 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC21.92■■□□□ 1.1
RIPK4P57078 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RIPK4P57078 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC21.92■■□□□ 1.1
RIPK4P57078 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC21.92■■□□□ 1.1
RIPK4P57078 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
RIPK4P57078 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC21.92■■□□□ 1.1
RIPK4P57078 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RIPK4P57078 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms