Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
WNT3P56703 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
WNT3P56703 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
WNT3P56703 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
WNT3P56703 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
WNT3P56703 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.91■□□□□ 0.14
WNT3P56703 PTCHD3P3-201ENST00000403073 906 ntBASIC15.91■□□□□ 0.14
WNT3P56703 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
WNT3P56703 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.91■□□□□ 0.14
WNT3P56703 AL031284.1-201ENST00000419297 478 ntBASIC15.91■□□□□ 0.14
WNT3P56703 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
WNT3P56703 HNRNPDP1-201ENST00000439535 754 ntBASIC15.91■□□□□ 0.14
WNT3P56703 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
WNT3P56703 AF186996.4-201ENST00000467186 377 ntBASIC15.91■□□□□ 0.14
WNT3P56703 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.91■□□□□ 0.14
WNT3P56703 SLC25A1P1-201ENST00000528351 927 ntBASIC15.91■□□□□ 0.14
WNT3P56703 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.91■□□□□ 0.14
WNT3P56703 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
WNT3P56703 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
WNT3P56703 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
WNT3P56703 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.91■□□□□ 0.14
WNT3P56703 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
WNT3P56703 CICP6-201ENST00000457191 2729 ntBASIC15.91■□□□□ 0.14
WNT3P56703 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
WNT3P56703 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
WNT3P56703 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
WNT3P56703 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.91■□□□□ 0.14
WNT3P56703 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.91■□□□□ 0.14
WNT3P56703 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
WNT3P56703 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
WNT3P56703 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
WNT3P56703 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
WNT3P56703 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
WNT3P56703 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
WNT3P56703 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
WNT3P56703 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
WNT3P56703 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
WNT3P56703 AC008741.2-201ENST00000612792 3115 ntBASIC15.9■□□□□ 0.14
WNT3P56703 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
WNT3P56703 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
WNT3P56703 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
WNT3P56703 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
WNT3P56703 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
WNT3P56703 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
WNT3P56703 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
WNT3P56703 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
WNT3P56703 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.9■□□□□ 0.14
WNT3P56703 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
WNT3P56703 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
WNT3P56703 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
WNT3P56703 RNPS1P1-201ENST00000507437 918 ntBASIC15.9■□□□□ 0.14
WNT3P56703 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
WNT3P56703 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.9■□□□□ 0.14
WNT3P56703 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.9■□□□□ 0.14
WNT3P56703 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.9■□□□□ 0.14
WNT3P56703 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.9■□□□□ 0.14
WNT3P56703 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.9■□□□□ 0.14
WNT3P56703 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
WNT3P56703 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
WNT3P56703 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
WNT3P56703 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
WNT3P56703 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
WNT3P56703 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
WNT3P56703 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
WNT3P56703 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.9■□□□□ 0.14
WNT3P56703 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
WNT3P56703 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
WNT3P56703 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
WNT3P56703 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
WNT3P56703 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
WNT3P56703 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
WNT3P56703 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.9■□□□□ 0.14
WNT3P56703 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.9■□□□□ 0.14
WNT3P56703 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
WNT3P56703 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.9■□□□□ 0.14
WNT3P56703 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.9■□□□□ 0.14
WNT3P56703 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
WNT3P56703 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.9■□□□□ 0.14
WNT3P56703 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.9■□□□□ 0.14
WNT3P56703 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.9■□□□□ 0.14
WNT3P56703 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
WNT3P56703 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
WNT3P56703 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.14
WNT3P56703 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
WNT3P56703 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
WNT3P56703 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
WNT3P56703 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.89■□□□□ 0.13
WNT3P56703 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.89■□□□□ 0.13
WNT3P56703 AC006504.4-201ENST00000592118 1568 ntBASIC15.89■□□□□ 0.13
WNT3P56703 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
WNT3P56703 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
WNT3P56703 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
WNT3P56703 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.89■□□□□ 0.13
WNT3P56703 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
WNT3P56703 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.89■□□□□ 0.13
WNT3P56703 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
WNT3P56703 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
WNT3P56703 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.89■□□□□ 0.13
WNT3P56703 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
WNT3P56703 SLC25A6P2-201ENST00000497974 877 ntBASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms