Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH13P55290 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH13P55290 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH13P55290 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH13P55290 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH13P55290 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CDH13P55290 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDH13P55290 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDH13P55290 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH13P55290 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDH13P55290 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CDH13P55290 AC106795.1-205ENST00000512851 1056 ntBASIC16.49■□□□□ 0.23
CDH13P55290 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH13P55290 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.49■□□□□ 0.23
CDH13P55290 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.49■□□□□ 0.23
CDH13P55290 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.49■□□□□ 0.23
CDH13P55290 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CDH13P55290 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.49■□□□□ 0.23
CDH13P55290 AL022326.1-202ENST00000641533 845 ntBASIC16.49■□□□□ 0.23
CDH13P55290 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH13P55290 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH13P55290 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CDH13P55290 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDH13P55290 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.49■□□□□ 0.23
CDH13P55290 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH13P55290 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.49■□□□□ 0.23
CDH13P55290 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CDH13P55290 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CDH13P55290 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.49■□□□□ 0.23
CDH13P55290 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH13P55290 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH13P55290 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.49■□□□□ 0.23
CDH13P55290 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CDH13P55290 AC132872.4-202ENST00000622924 2756 ntBASIC16.49■□□□□ 0.23
CDH13P55290 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH13P55290 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CDH13P55290 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH13P55290 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH13P55290 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH13P55290 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CDH13P55290 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH13P55290 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH13P55290 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH13P55290 AC006538.1-201ENST00000567905 1585 ntBASIC16.48■□□□□ 0.23
CDH13P55290 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CDH13P55290 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.48■□□□□ 0.23
CDH13P55290 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH13P55290 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH13P55290 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH13P55290 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH13P55290 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.48■□□□□ 0.23
CDH13P55290 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH13P55290 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH13P55290 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.48■□□□□ 0.23
CDH13P55290 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.48■□□□□ 0.23
CDH13P55290 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.48■□□□□ 0.23
CDH13P55290 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.48■□□□□ 0.23
CDH13P55290 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.48■□□□□ 0.23
CDH13P55290 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.48■□□□□ 0.23
CDH13P55290 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH13P55290 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH13P55290 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.48■□□□□ 0.23
CDH13P55290 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH13P55290 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.48■□□□□ 0.23
CDH13P55290 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.48■□□□□ 0.23
CDH13P55290 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH13P55290 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.48■□□□□ 0.23
CDH13P55290 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH13P55290 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH13P55290 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CDH13P55290 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH13P55290 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
CDH13P55290 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH13P55290 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
CDH13P55290 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH13P55290 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH13P55290 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.47■□□□□ 0.23
CDH13P55290 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH13P55290 NCF1C-201ENST00000438382 1427 ntBASIC16.47■□□□□ 0.23
CDH13P55290 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH13P55290 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH13P55290 FER1L4-210ENST00000615531 5998 ntBASIC16.47■□□□□ 0.23
CDH13P55290 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH13P55290 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CDH13P55290 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH13P55290 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH13P55290 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH13P55290 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH13P55290 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH13P55290 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH13P55290 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.47■□□□□ 0.23
CDH13P55290 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH13P55290 MTDHP3-201ENST00000594186 672 ntBASIC16.47■□□□□ 0.23
CDH13P55290 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH13P55290 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDH13P55290 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH13P55290 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.47■□□□□ 0.23
CDH13P55290 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CDH13P55290 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH13P55290 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms