Protein–RNA interactions for Protein: P55008

AIF1, Allograft inflammatory factor 1, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AIF1P55008 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AIF1P55008 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AIF1P55008 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AIF1P55008 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.3■□□□□ 0.36
AIF1P55008 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AIF1P55008 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AIF1P55008 GGT3P-204ENST00000453783 1664 ntBASIC17.3■□□□□ 0.36
AIF1P55008 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
AIF1P55008 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AIF1P55008 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.3■□□□□ 0.36
AIF1P55008 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
AIF1P55008 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AIF1P55008 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
AIF1P55008 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.3■□□□□ 0.36
AIF1P55008 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AIF1P55008 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.3■□□□□ 0.36
AIF1P55008 KRT18P2-201ENST00000447938 1258 ntBASIC17.3■□□□□ 0.36
AIF1P55008 KRT18P3-201ENST00000451602 1288 ntBASIC17.3■□□□□ 0.36
AIF1P55008 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.3■□□□□ 0.36
AIF1P55008 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.3■□□□□ 0.36
AIF1P55008 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.3■□□□□ 0.36
AIF1P55008 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.3■□□□□ 0.36
AIF1P55008 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.3■□□□□ 0.36
AIF1P55008 KRT19P2-202ENST00000557173 1012 ntBASIC17.3■□□□□ 0.36
AIF1P55008 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
AIF1P55008 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.3■□□□□ 0.36
AIF1P55008 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AIF1P55008 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
AIF1P55008 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.3■□□□□ 0.36
AIF1P55008 AC020765.3-201ENST00000613051 740 ntBASIC17.3■□□□□ 0.36
AIF1P55008 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.3■□□□□ 0.36
AIF1P55008 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
AIF1P55008 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AIF1P55008 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AIF1P55008 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AIF1P55008 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
AIF1P55008 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AIF1P55008 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AIF1P55008 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AIF1P55008 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AIF1P55008 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AIF1P55008 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
AIF1P55008 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.29■□□□□ 0.36
AIF1P55008 BCAR1-209ENST00000546196 1340 ntBASIC17.29■□□□□ 0.36
AIF1P55008 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.29■□□□□ 0.36
AIF1P55008 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
AIF1P55008 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AIF1P55008 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
AIF1P55008 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AIF1P55008 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
AIF1P55008 AC140658.5-201ENST00000438532 169 ntBASIC17.29■□□□□ 0.36
AIF1P55008 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AIF1P55008 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
AIF1P55008 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.29■□□□□ 0.36
AIF1P55008 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.29■□□□□ 0.36
AIF1P55008 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
AIF1P55008 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
AIF1P55008 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.29■□□□□ 0.36
AIF1P55008 GPAA1P2-202ENST00000606848 1787 ntBASIC17.29■□□□□ 0.36
AIF1P55008 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AIF1P55008 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AIF1P55008 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.29■□□□□ 0.36
AIF1P55008 GGT4P-201ENST00000623672 1708 ntBASIC17.29■□□□□ 0.36
AIF1P55008 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AIF1P55008 AC025580.3-201ENST00000617932 1424 ntBASIC17.29■□□□□ 0.36
AIF1P55008 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AIF1P55008 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
AIF1P55008 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AIF1P55008 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AIF1P55008 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.28■□□□□ 0.36
AIF1P55008 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
AIF1P55008 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.28■□□□□ 0.36
AIF1P55008 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
AIF1P55008 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
AIF1P55008 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
AIF1P55008 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AIF1P55008 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.28■□□□□ 0.36
AIF1P55008 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.28■□□□□ 0.36
AIF1P55008 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
AIF1P55008 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AIF1P55008 AL022342.1-201ENST00000400363 863 ntBASIC17.28■□□□□ 0.36
AIF1P55008 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.28■□□□□ 0.36
AIF1P55008 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AIF1P55008 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.28■□□□□ 0.36
AIF1P55008 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.28■□□□□ 0.36
AIF1P55008 PDPK2P-202ENST00000562415 1191 ntBASIC17.28■□□□□ 0.36
AIF1P55008 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.28■□□□□ 0.36
AIF1P55008 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AIF1P55008 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
AIF1P55008 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AIF1P55008 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AIF1P55008 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.28■□□□□ 0.36
AIF1P55008 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AIF1P55008 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
AIF1P55008 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
AIF1P55008 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AIF1P55008 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
AIF1P55008 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AIF1P55008 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AIF1P55008 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms