Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN5P54829 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN5P54829 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PTPN5P54829 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PTPN5P54829 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.35■□□□□ 0.37
PTPN5P54829 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC17.35■□□□□ 0.37
PTPN5P54829 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.35■□□□□ 0.37
PTPN5P54829 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPN5P54829 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.35■□□□□ 0.37
PTPN5P54829 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
PTPN5P54829 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPN5P54829 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN5P54829 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN5P54829 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN5P54829 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
PTPN5P54829 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PTPN5P54829 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN5P54829 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPN5P54829 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPN5P54829 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PTPN5P54829 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN5P54829 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PTPN5P54829 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN5P54829 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN5P54829 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PTPN5P54829 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN5P54829 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPN5P54829 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN5P54829 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPN5P54829 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN5P54829 FZD10-202ENST00000539839 3282 ntBASIC17.34■□□□□ 0.37
PTPN5P54829 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN5P54829 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PTPN5P54829 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN5P54829 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN5P54829 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PTPN5P54829 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN5P54829 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN5P54829 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN5P54829 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN5P54829 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PTPN5P54829 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
PTPN5P54829 AC140658.5-201ENST00000438532 169 ntBASIC17.34■□□□□ 0.37
PTPN5P54829 SPTLC1P1-201ENST00000447199 261 ntBASIC17.34■□□□□ 0.37
PTPN5P54829 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.34■□□□□ 0.37
PTPN5P54829 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.34■□□□□ 0.37
PTPN5P54829 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.34■□□□□ 0.37
PTPN5P54829 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN5P54829 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN5P54829 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PTPN5P54829 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PTPN5P54829 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN5P54829 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN5P54829 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.34■□□□□ 0.37
PTPN5P54829 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN5P54829 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.34■□□□□ 0.37
PTPN5P54829 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.34■□□□□ 0.37
PTPN5P54829 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN5P54829 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.34■□□□□ 0.37
PTPN5P54829 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PTPN5P54829 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.34■□□□□ 0.37
PTPN5P54829 RARRES2P8-201ENST00000566335 367 ntBASIC17.34■□□□□ 0.37
PTPN5P54829 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.34■□□□□ 0.37
PTPN5P54829 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.34■□□□□ 0.37
PTPN5P54829 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.34■□□□□ 0.37
PTPN5P54829 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.34■□□□□ 0.37
PTPN5P54829 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN5P54829 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PTPN5P54829 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN5P54829 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN5P54829 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN5P54829 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN5P54829 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
PTPN5P54829 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
PTPN5P54829 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.33■□□□□ 0.37
PTPN5P54829 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.33■□□□□ 0.37
PTPN5P54829 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN5P54829 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.33■□□□□ 0.36
PTPN5P54829 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN5P54829 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN5P54829 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PTPN5P54829 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN5P54829 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.33■□□□□ 0.36
PTPN5P54829 KRT8P23-201ENST00000560090 1207 ntBASIC17.33■□□□□ 0.36
PTPN5P54829 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN5P54829 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN5P54829 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PTPN5P54829 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN5P54829 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN5P54829 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PTPN5P54829 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN5P54829 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN5P54829 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PTPN5P54829 AC097637.2-201ENST00000624096 1997 ntBASIC17.33■□□□□ 0.36
PTPN5P54829 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN5P54829 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN5P54829 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
PTPN5P54829 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN5P54829 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN5P54829 AL023806.1-201ENST00000603994 1649 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms