Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.49■□□□□ 0.87
PDE1AP54750 CRYGEP-201ENST00000412192 528 ntBASIC20.49■□□□□ 0.87
PDE1AP54750 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.49■□□□□ 0.87
PDE1AP54750 MIR4515-201ENST00000584082 81 ntBASIC20.49■□□□□ 0.87
PDE1AP54750 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PDE1AP54750 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.49■□□□□ 0.87
PDE1AP54750 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE1AP54750 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDE1AP54750 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE1AP54750 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDE1AP54750 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE1AP54750 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PDE1AP54750 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.49■□□□□ 0.87
PDE1AP54750 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE1AP54750 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE1AP54750 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.49■□□□□ 0.87
PDE1AP54750 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
PDE1AP54750 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
PDE1AP54750 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.48■□□□□ 0.87
PDE1AP54750 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
PDE1AP54750 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20.48■□□□□ 0.87
PDE1AP54750 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDE1AP54750 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDE1AP54750 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
PDE1AP54750 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.48■□□□□ 0.87
PDE1AP54750 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC20.48■□□□□ 0.87
PDE1AP54750 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDE1AP54750 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.48■□□□□ 0.87
PDE1AP54750 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDE1AP54750 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDE1AP54750 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDE1AP54750 HMGA1P7-201ENST00000406908 502 ntBASIC20.48■□□□□ 0.87
PDE1AP54750 AC079776.4-201ENST00000511039 504 ntBASIC20.48■□□□□ 0.87
PDE1AP54750 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.48■□□□□ 0.87
PDE1AP54750 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
PDE1AP54750 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
PDE1AP54750 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDE1AP54750 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.48■□□□□ 0.87
PDE1AP54750 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.48■□□□□ 0.87
PDE1AP54750 AP001350.2-201ENST00000625104 1094 ntBASIC20.48■□□□□ 0.87
PDE1AP54750 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDE1AP54750 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PDE1AP54750 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDE1AP54750 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
PDE1AP54750 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.48■□□□□ 0.87
PDE1AP54750 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDE1AP54750 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDE1AP54750 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDE1AP54750 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDE1AP54750 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDE1AP54750 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDE1AP54750 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PDE1AP54750 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDE1AP54750 AC104109.2-201ENST00000602919 1418 ntBASIC20.47■□□□□ 0.87
PDE1AP54750 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PDE1AP54750 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDE1AP54750 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.47■□□□□ 0.87
PDE1AP54750 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDE1AP54750 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.47■□□□□ 0.87
PDE1AP54750 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDE1AP54750 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
PDE1AP54750 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.47■□□□□ 0.87
PDE1AP54750 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
PDE1AP54750 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.47■□□□□ 0.87
PDE1AP54750 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDE1AP54750 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDE1AP54750 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.47■□□□□ 0.87
PDE1AP54750 AC010507.1-201ENST00000633895 436 ntBASIC20.47■□□□□ 0.87
PDE1AP54750 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDE1AP54750 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
PDE1AP54750 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
PDE1AP54750 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDE1AP54750 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDE1AP54750 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDE1AP54750 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDE1AP54750 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
PDE1AP54750 IL9RP2-201ENST00000423948 1312 ntBASIC20.47■□□□□ 0.87
PDE1AP54750 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.47■□□□□ 0.87
PDE1AP54750 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDE1AP54750 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.47■□□□□ 0.87
PDE1AP54750 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE1AP54750 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PDE1AP54750 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE1AP54750 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDE1AP54750 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDE1AP54750 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE1AP54750 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE1AP54750 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
PDE1AP54750 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.46■□□□□ 0.87
PDE1AP54750 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC20.46■□□□□ 0.87
PDE1AP54750 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
PDE1AP54750 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PDE1AP54750 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.46■□□□□ 0.87
PDE1AP54750 RHOQP3-201ENST00000437982 621 ntBASIC20.46■□□□□ 0.87
PDE1AP54750 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDE1AP54750 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.46■□□□□ 0.87
PDE1AP54750 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.46■□□□□ 0.87
PDE1AP54750 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.46■□□□□ 0.87
PDE1AP54750 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE1AP54750 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms