Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPT1AP50416 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPT1AP50416 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPT1AP50416 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPT1AP50416 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.5■□□□□ 0.55
CPT1AP50416 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CPT1AP50416 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.49■□□□□ 0.55
CPT1AP50416 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPT1AP50416 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPT1AP50416 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPT1AP50416 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPT1AP50416 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPT1AP50416 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.49■□□□□ 0.55
CPT1AP50416 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPT1AP50416 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPT1AP50416 GK-202ENST00000378941 458 ntTSL 3 BASIC18.49■□□□□ 0.55
CPT1AP50416 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPT1AP50416 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPT1AP50416 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.49■□□□□ 0.55
CPT1AP50416 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.49■□□□□ 0.55
CPT1AP50416 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.49■□□□□ 0.55
CPT1AP50416 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.49■□□□□ 0.55
CPT1AP50416 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.49■□□□□ 0.55
CPT1AP50416 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.49■□□□□ 0.55
CPT1AP50416 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.49■□□□□ 0.55
CPT1AP50416 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.49■□□□□ 0.55
CPT1AP50416 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CPT1AP50416 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPT1AP50416 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPT1AP50416 CROCCP2-202ENST00000412962 2773 ntBASIC18.49■□□□□ 0.55
CPT1AP50416 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.49■□□□□ 0.55
CPT1AP50416 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
CPT1AP50416 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
CPT1AP50416 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPT1AP50416 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.49■□□□□ 0.55
CPT1AP50416 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPT1AP50416 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPT1AP50416 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CPT1AP50416 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPT1AP50416 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CPT1AP50416 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPT1AP50416 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPT1AP50416 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPT1AP50416 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPT1AP50416 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPT1AP50416 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPT1AP50416 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPT1AP50416 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPT1AP50416 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.48■□□□□ 0.55
CPT1AP50416 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPT1AP50416 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.48■□□□□ 0.55
CPT1AP50416 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPT1AP50416 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPT1AP50416 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.48■□□□□ 0.55
CPT1AP50416 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.48■□□□□ 0.55
CPT1AP50416 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.48■□□□□ 0.55
CPT1AP50416 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPT1AP50416 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CPT1AP50416 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.48■□□□□ 0.55
CPT1AP50416 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.48■□□□□ 0.55
CPT1AP50416 MTND6P24-201ENST00000440466 518 ntBASIC18.48■□□□□ 0.55
CPT1AP50416 AC009477.1-201ENST00000452936 217 ntBASIC18.48■□□□□ 0.55
CPT1AP50416 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPT1AP50416 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.48■□□□□ 0.55
CPT1AP50416 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.48■□□□□ 0.55
CPT1AP50416 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.48■□□□□ 0.55
CPT1AP50416 CR383656.12-201ENST00000549567 513 ntBASIC18.48■□□□□ 0.55
CPT1AP50416 AL589739.1-201ENST00000607720 493 ntBASIC18.48■□□□□ 0.55
CPT1AP50416 TEX28P1-201ENST00000613479 1221 ntBASIC18.48■□□□□ 0.55
CPT1AP50416 TEX28P2-201ENST00000617764 1221 ntBASIC18.48■□□□□ 0.55
CPT1AP50416 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPT1AP50416 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPT1AP50416 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.48■□□□□ 0.55
CPT1AP50416 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.48■□□□□ 0.55
CPT1AP50416 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPT1AP50416 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CPT1AP50416 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CPT1AP50416 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.48■□□□□ 0.55
CPT1AP50416 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPT1AP50416 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPT1AP50416 AC087499.5-201ENST00000452760 1342 ntBASIC18.48■□□□□ 0.55
CPT1AP50416 AL671710.1-201ENST00000610245 2349 ntBASIC18.48■□□□□ 0.55
CPT1AP50416 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPT1AP50416 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPT1AP50416 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPT1AP50416 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.47■□□□□ 0.55
CPT1AP50416 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.47■□□□□ 0.55
CPT1AP50416 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CPT1AP50416 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPT1AP50416 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPT1AP50416 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPT1AP50416 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CPT1AP50416 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPT1AP50416 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.47■□□□□ 0.55
CPT1AP50416 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPT1AP50416 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.47■□□□□ 0.55
CPT1AP50416 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.47■□□□□ 0.55
CPT1AP50416 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPT1AP50416 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPT1AP50416 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms