Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2AP49459 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2AP49459 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
UBE2AP49459 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
UBE2AP49459 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2AP49459 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2AP49459 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2AP49459 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2AP49459 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2AP49459 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2AP49459 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
UBE2AP49459 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2AP49459 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2AP49459 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2AP49459 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2AP49459 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2AP49459 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2AP49459 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
UBE2AP49459 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
UBE2AP49459 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC10.72□□□□□ -0.69
UBE2AP49459 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC10.72□□□□□ -0.69
UBE2AP49459 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC10.72□□□□□ -0.69
UBE2AP49459 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC10.72□□□□□ -0.69
UBE2AP49459 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC10.72□□□□□ -0.69
UBE2AP49459 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC10.72□□□□□ -0.69
UBE2AP49459 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC10.72□□□□□ -0.69
UBE2AP49459 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
UBE2AP49459 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 AL845331.1-201ENST00000424978 1190 ntBASIC10.72□□□□□ -0.69
UBE2AP49459 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC10.72□□□□□ -0.69
UBE2AP49459 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC10.72□□□□□ -0.69
UBE2AP49459 DRAXINP1-201ENST00000437611 948 ntBASIC10.72□□□□□ -0.69
UBE2AP49459 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
UBE2AP49459 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC10.72□□□□□ -0.69
UBE2AP49459 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC10.72□□□□□ -0.69
UBE2AP49459 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
UBE2AP49459 STK25P1-201ENST00000585406 838 ntBASIC10.72□□□□□ -0.69
UBE2AP49459 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC10.72□□□□□ -0.69
UBE2AP49459 AC011467.2-201ENST00000598425 242 ntBASIC10.72□□□□□ -0.69
UBE2AP49459 AL353801.3-201ENST00000609898 542 ntBASIC10.72□□□□□ -0.69
UBE2AP49459 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 BCL10-202ENST00000620248 774 ntTSL 5 BASIC10.72□□□□□ -0.69
UBE2AP49459 AC093458.2-201ENST00000623150 629 ntBASIC10.72□□□□□ -0.69
UBE2AP49459 AC073592.5-201ENST00000624854 528 ntBASIC10.72□□□□□ -0.69
UBE2AP49459 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
UBE2AP49459 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
UBE2AP49459 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 NSUN5P1-202ENST00000421140 1535 ntBASIC10.72□□□□□ -0.69
UBE2AP49459 NSUN5P2-203ENST00000457352 1529 ntBASIC10.72□□□□□ -0.69
UBE2AP49459 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
UBE2AP49459 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
UBE2AP49459 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 AC116353.5-201ENST00000638148 1699 ntBASIC10.72□□□□□ -0.69
UBE2AP49459 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
UBE2AP49459 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC10.72□□□□□ -0.69
UBE2AP49459 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
UBE2AP49459 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2AP49459 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC10.72□□□□□ -0.69
UBE2AP49459 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC10.72□□□□□ -0.69
UBE2AP49459 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC10.72□□□□□ -0.69
UBE2AP49459 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2AP49459 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC10.71□□□□□ -0.69
UBE2AP49459 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC10.71□□□□□ -0.69
UBE2AP49459 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2AP49459 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2AP49459 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2AP49459 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2AP49459 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
UBE2AP49459 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2AP49459 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2AP49459 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2AP49459 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2AP49459 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2AP49459 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
UBE2AP49459 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2AP49459 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2AP49459 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms